KEGG   Pseudomonas agarici: AWM79_07925
Entry
AWM79_07925       CDS       T11104                                 
Name
(GenBank) DNA gyrase subunit A
  KO
K02469  DNA gyrase subunit A [EC:5.6.2.2]
Organism
pagb  Pseudomonas agarici
Brite
KEGG Orthology (KO) [BR:pagb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pagb03032]
    AWM79_07925
   03400 DNA repair and recombination proteins [BR:pagb03400]
    AWM79_07925
Enzymes [BR:pagb01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     AWM79_07925
DNA replication proteins [BR:pagb03032]
 Prokaryotic type
  DNA Topoisomerases
   AWM79_07925
DNA repair and recombination proteins [BR:pagb03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      AWM79_07925
SSDB
Motif
Pfam: DNA_topoisoIV DNA_gyraseA_C DUF1416
Other DBs
NCBI-ProteinID: AMB85232
UniProt: A0A0X1SZI3
LinkDB
Position
complement(1813659..1816457)
AA seq 932 aa
MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMSELGNDWN
KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAM
RYTEVRMTKLAHELLADLHKETVDWVPNYDGTEQIPAVMPTRIPNLLVNGSSGIAVGMAT
NIPPHNLGEVIDGCLALIDNPELTVDELMQYIPGPDFPTAAIINGRAGIIEAYRTGRGRI
YMRARSTVEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKLEGITELRDESDKD
GMRVVIELRRGEVPEVILNNLYAQTQLQSVFGINIVALIDGRPRILNLKDLLEAFVRHRR
EVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPSEAKEALISTPWESSA
VMTMVERAGADSCRPENLDPQYGLRDGKYFLSPEQAQAILELRLHRLTGLEHEKLLAEYQ
EILNQIGELIRILNSATRLMEVIREELEVIRAEYGDARRTEILDARLDLTLGDMIPEEER
VVTISHSGYAKTQPLSAYQAQRRGGKGKSATGVKDEDYIAHLLVANSHATLLLFSSKGKV
YWLKTYEIPEASRAARGRPLVNLLPLDEGEYITTMLQIDLEALQQSAGADDELDDADDAV
IEGEVIEADEAGEVAEEVDGDTAELVAEPTGAYIFMATAFGTVKKTPLAQFSRPRSSGLI
ALKLKEGDTLIAAAITDGAKEVMLFSNAGKVIRFAESVVREMGRGARGIRGMRIGKGQQL
ISMLIPESGAQILTASERGFGKRTPLSKFPRRGRGGQGVIAMVTKDRNGQLIGAIQVQEG
EEIMLISDQGTLVRTRVDEVSSLGRNTQGVTLIKLANDETLVGLERVQEPSEVEGEEPEN
EEGVEFEGEVLIDGMADDSSLDAAVDEVEPQD
NT seq 2799 nt   +upstreamnt  +downstreamnt
atgggcgaactggccaaagaaatcctcccggtcaatatcgaagacgagctgaaacagtcc
tacctcgactacgcgatgagcgtgattgtcgggcgggcattgcccgatgcgcgcgatggc
ttgaagcccgtgcaccggcgtgtcctgtttgcgatgagtgagctgggtaacgactggaac
aagccttacaagaaatctgcccgtgtggtcggtgacgtgatcggtaagtatcaccctcac
ggcgatactgcggtgtacgacaccattgttcggatggcgcagccattctccctgcgttat
ctactggtcgacggtcagggcaactttggttcggtcgacggcgacaatgccgcggccatg
cgttacaccgaagtgcgcatgaccaagctggcgcacgagctgctggccgacctgcacaag
gaaaccgtggactgggtgcccaactatgacggcaccgagcaaatcccggcggtcatgcca
acccgtatccccaacctgttggtcaacggttccagcggcatcgcggtgggtatggcgacc
aacattccaccgcacaacctcggcgaagtgatcgacggttgtctggcgctgatcgacaac
cccgaactgaccgtcgatgaactgatgcagtacattccggggccggacttcccgaccgcc
gcgatcatcaacggtcgtgccgggatcatcgaggcctatcgcaccggtcgcggacgtatc
tacatgcgtgcccgctcgaccgtcgaggatatcgacaaggtcggcggtcgccagcagatc
gtcatcaccgaactgccctaccaactgaacaaggctcgtctgatcgagaagatcgccgaa
ctggtcaaagagaaaaaactcgaaggcatcaccgagctgcgcgatgagtccgacaaggac
ggtatgcgcgtagtgatcgagttgcgtcgtggcgaggtgcctgaggtcatcctcaacaat
ctctacgcccagacccagttgcagagcgtgttcggtatcaacatcgttgcgctgatcgac
ggtcgcccgcggatcctcaatctcaaggatctgctggaagcgttcgtccgtcaccgtcgc
gaagtggtgacccgacgcaccgtgttcgaactgcgcaaggcccgcgagcgtgggcatatt
ctcgaaggccaagcagttgcgctgtcgaacatcgatccggtcattgccctgatcaaggct
tcgccaaccccatcggaagccaaggaagcgctgatcagcacgccttgggagtccagtgcg
gtgatgaccatggtcgagcgtgcgggagcagattcgtgccgtccggaaaacctcgatccg
caatacggtctgcgtgacggcaagtacttcttgtcgccggagcaggcgcaagccattctg
gaactgcgcttgcaccgcctgaccggcctggagcacgagaagttgctggccgagtaccag
gaaatcctcaaccagatcggcgaactgatccgcatcctcaacagtgccacgcgcctgatg
gaagtgatccgcgaagaactggaggtcattcgcgccgagtacggcgatgcgcgtcgcacc
gaaatcctcgatgcgcgcctcgacctgaccctgggcgatatgattcccgaagaagagcgt
gtggtgaccatttcccacagcggctacgccaagacccagccgttgtcggcctatcaagcc
cagcgtcgcggtggcaaaggcaagtcggcgaccggcgtcaaggatgaggattacatcgcc
cacctgctggttgccaacagccatgccacgctcctgctgttctccagcaaaggcaaggtg
tattggctcaagacctatgagattcccgaggcttctcgcgccgctcgtggccgaccgctg
gtcaatctgctgccgcttgacgaaggtgagtacatcaccaccatgctgcagatcgacctg
gaagccctgcagcagagcgccggtgccgatgacgagctggacgatgccgacgatgcggtg
atcgagggtgaggtgatcgaagccgatgaggcgggagaggtagccgaagaggtggatggc
gacacggcggagttggtggccgagccgaccggtgcctacatcttcatggccacggccttc
ggtacggtcaagaaaacccccttggcacagttcagtcgtccacgctccagtggcttgatc
gccttgaaactgaaggaaggcgacaccctgattgctgccgcgatcactgacggtgccaag
gaagtcatgctgttctccaatgccggtaaggtgattcgtttcgctgagagcgtggttcgc
gagatgggtcgtggtgcacgcggtattcgtggcatgcgcatcggtaaggggcagcagttg
atttccatgctgatcccggaatcgggggcgcagatcctgacggcttccgaacgcggtttt
ggtaagcgcacgccgttgagcaagttcccacgacgcggacgtggcggccaaggtgtgatc
gccatggtcaccaaggatcgcaacggccaactgattggggcgatccaggtgcaggaaggt
gaggagatcatgctgatttccgaccagggcaccctggtgcgtacccgtgtcgatgaagtc
tccagcctggggcgtaacacccagggcgtgaccttgatcaagctggccaacgacgagaca
ctggtcgggcttgagcgggtacaggaaccgtcggaagtcgaaggcgaggagccggaaaat
gaagaaggcgtcgagttcgagggcgaagtgttgatcgatggcatggccgacgactcgtcg
ctggacgcggcggtagatgaagttgaaccgcaggattaa

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