Pseudomonas agarici: AWM79_09385
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Entry
AWM79_09385 CDS
T11104
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pagb Pseudomonas agarici
Pathway
pagb00061
Fatty acid biosynthesis
pagb00071
Fatty acid degradation
pagb01100
Metabolic pathways
pagb01212
Fatty acid metabolism
pagb02024
Quorum sensing
pagb04146
Peroxisome
Module
pagb_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pagb00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
AWM79_09385
00071 Fatty acid degradation
AWM79_09385
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
AWM79_09385
09145 Cellular community - prokaryotes
02024 Quorum sensing
AWM79_09385
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pagb01004
]
AWM79_09385
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pagb04147
]
AWM79_09385
Enzymes [BR:
pagb01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
AWM79_09385
Lipid biosynthesis proteins [BR:
pagb01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
AWM79_09385
Exosome [BR:
pagb04147
]
Exosomal proteins
Exosomal proteins of breast milk
AWM79_09385
Exosomal proteins of breast cancer cells
AWM79_09385
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Paralog
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GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
AMB85498
UniProt:
A0A0X1T0A5
LinkDB
All DBs
Position
complement(2127489..2129177)
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AA seq
562 aa
AA seq
DB search
MQADFWNDKRPVGVPLDIDTGAYKSVIEVFERSCKKFSDRPAFSNMGVTLTYAELERYSA
AFAGYLQANTDLQPGDRIAVQLPNVLHYPIAVFGAMRAGLVVVNTNPLYTVREMRHQFED
SGARALVYLNLFGARVEEVLPDTRIEFLIEAKMGDLMSPAKGWLTNLVVDKVKKLVAPYQ
LPQAISFKSALHLGRGQSIQPLKVSLDDIAVLQYTGGTTGLAKGAMLSHGNLVANMQQAR
ACLSQPGPDGHPLLKEGQEVMIAPLPLYHIYAFTANCMCMMVTGNHNVLISNPRDIGGFI
KELKKWRFSALLGLNTLFVALMEHPDFKTLDFSCLKLTNSGGTALVKATAERWEKVTGCR
ITEGYGLTETSPIVCANPYGNGGRLGSVGIPVPGTALRITDEQGIEQPLGQPGELCIKGP
QVMKGYWRQPQATAEVLDAEGWFKSGDIAVIDPDGFVRIVDRKKDMIIISGFNVYPNEIE
DVIMAHPKVANCAVIGVADERSGEAVKLFVVAREAGISVEELRAYCKENFTGYKIPKHIV
LRDSLPMTPVGKILRRELRDSV
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgcaagctgatttctggaatgacaagcgcccagtcggtgtgcctctggatatcgacaca
ggggcttacaaatcggtgatcgaggtcttcgagcgctcatgcaagaaattctccgaccgt
ccggccttcagcaacatgggcgtgaccctgacctacgccgaactcgaacgctacagcgcg
gcctttgccggttacctgcaagccaatacagacctgcaaccgggcgaccggatcgccgtg
cagttgcctaatgtcctgcattatcccattgcggtgttcggtgccatgcgtgccgggctg
gtggtggtcaacaccaatccgctgtacaccgtgcgcgagatgcgccatcagttcgaggac
tccggcgcccgggcactggtgtacctgaacctcttcggtgcgcgggtcgaggaagtattg
cccgatacccggatcgagttcctgatcgaagcgaagatgggcgacctgatgtcgccggcc
aagggctggctgaccaatctggtggtcgacaaggtgaagaagctggtagcgccttaccag
ttgccccaggcgatctccttcaagagcgccttgcacctgggccgtggtcagagcatccag
ccactcaaggtcagcctcgatgacattgcggtgttgcaatacaccggtggcaccaccggc
ttggccaagggcgctatgctcagccacggcaatctggtggcgaacatgcagcaggcgcgg
gcctgcctgtcccagccgggccccgacggccatccgctactcaaggaaggccaggaagtg
atgatcgcgccgttgccgctttatcacatctatgcgttcaccgccaattgcatgtgcatg
atggtcaccggcaatcataacgtgctgatcagcaacccacgggatatcggcggttttatc
aaggaactgaagaagtggcgcttttccgcgttgctgggactcaataccctgtttgtggcc
ttgatggagcacccggacttcaagaccctggacttctcctgcctgaaacttaccaactcc
ggcggcaccgcactggtcaaggccaccgccgagcgctgggagaaagtcacgggctgtcgc
atcaccgaaggttacgggctgaccgagacttcaccgattgtctgcgccaatccctatggc
aacggggggcggttgggctcggtcggtatcccggtgccgggtaccgccctgcggatcacc
gatgagcagggaatcgaacagccgttgggccagcccggtgagttgtgcatcaaggggccc
caggtgatgaaaggctactggcggcaaccgcaagcgacggccgaggtgctggatgccgag
ggctggtttaaaagtggcgatatcgccgtgatcgacccggatggttttgtccgtattgtc
gatcgcaagaaggacatgatcatcatctccggcttcaatgtatacccgaatgaaatcgaa
gacgtgataatggctcacccgaaagtcgccaactgcgcggtgattggcgttgcggacgaa
cgttcgggtgaggcggtgaagttgttcgtggtcgcgcgggaagcggggatcagcgttgaa
gaactgcgggcttactgcaaggaaaacttcacgggctacaaaatacccaagcatatcgtg
ctgcgtgattcgctgccgatgacaccggtgggcaagattctgcggcgggagctgcgcgat
agcgtctga
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