Pseudomonas agarici: AWM79_09525
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Entry
AWM79_09525 CDS
T11104
Symbol
groEL
Name
(GenBank) molecular chaperone GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pagb Pseudomonas agarici
Pathway
pagb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pagb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AWM79_09525 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pagb03019
]
AWM79_09525 (groEL)
03110 Chaperones and folding catalysts [BR:
pagb03110
]
AWM79_09525 (groEL)
03029 Mitochondrial biogenesis [BR:
pagb03029
]
AWM79_09525 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pagb04147
]
AWM79_09525 (groEL)
Enzymes [BR:
pagb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
AWM79_09525 (groEL)
Messenger RNA biogenesis [BR:
pagb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
AWM79_09525 (groEL)
Chaperones and folding catalysts [BR:
pagb03110
]
Heat shock proteins
HSP60 / Chaperonin
AWM79_09525 (groEL)
Mitochondrial biogenesis [BR:
pagb03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
AWM79_09525 (groEL)
Exosome [BR:
pagb04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
AWM79_09525 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
AWM79_09525 (groEL)
Exosomal proteins of breast cancer cells
AWM79_09525 (groEL)
Exosomal proteins of colorectal cancer cells
AWM79_09525 (groEL)
Exosomal proteins of bladder cancer cells
AWM79_09525 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AMB85525
UniProt:
A0A0X1T0B9
LinkDB
All DBs
Position
complement(2157958..2159604)
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AA seq
548 aa
AA seq
DB search
MAAKEVLFGDSARKKMLKGVNVLADAVKATLGPKGRNVIIEKSFGAPTITKDGVSVAKEI
ELEDRFENMGAQLVKDVASRANDDAGDGTTTATVLAQSIVNEGLKAVAAGMNPMDLKRGI
DKATIAIVKELKSLSKPCADTKAIAQVGTISANSDSSIGDIIAEAMEKVGKEGVITVEEG
SGLENELSVVEGMQFDRGYLSPYFVNKPDTMVAELDSPLILLVDKKISNIREMLPVLESV
AKAGRPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAVLTGGTV
ISEEIGLSLESTTLEHLGSAKRVTLSKENTIIVDGAGVQSDIEARIAQIRAQVAETSSDY
DREKLQERLAKLSGGVAVIKVGAGSEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALI
RALEALTELKGDNADQNVGIAVLRRAVEAPLRQIVANSGDEPSVVVDKVKNGRGSFGYNA
ATGEYGDMIEMGILDPTKVTRSALQAAASISGLMLTTEAAVADAPKKDAPAGGGMPDMGG
MGGMGGMM
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaaagaagttctgtttggcgactccgcccgtaagaaaatgctcaaaggcgtc
aacgtcctggctgacgccgtaaaagccaccctgggcccgaaaggccgtaacgtgatcatc
gagaagagcttcggcgctccgaccatcaccaaggacggcgtttccgttgccaaggaaatc
gagctggaagaccgtttcgagaacatgggcgcgcagttggtcaaggacgttgcttcccgt
gccaacgatgacgctggcgacggtaccaccaccgccactgtcttggcccagtcgatcgtc
aacgaaggcctgaaggctgttgctgccggcatgaacccgatggacctcaagcgcggcatc
gacaaggcaaccatcgccattgtcaaggagctgaagtcgctgtccaagccttgcgccgac
accaaggctatcgctcaggtaggtaccatctccgccaactccgacagctccatcggcgac
atcattgccgaagccatggaaaaagtcggtaaagaaggtgtgatcaccgttgaagaaggc
tcgggcctggaaaacgaactgtcggttgtggaaggcatgcagttcgaccgtggctacctg
tccccgtacttcgtcaacaagccagacaccatggttgccgagctggatagcccgctgatc
ctgctggtggacaagaagatctccaacatccgcgaaatgctgccagtgctggaatcggtt
gccaaggccggtcgcccattgctgatcgtagctgaagacgtcgaaggcgaggccctggcg
actctggttgtgaacaacatgcgtggtatcgtcaaggtcgctgccgtcaaggcaccgggt
ttcggcgatcgtcgtaaagccatgctgcaggacatcgctgtcctgactggcggcaccgtt
atctccgaagagatcggtctgagcctggagagcaccactctggagcacctgggtagcgcc
aagcgcgtgactctgtccaaggaaaacaccatcatcgtcgacggtgctggcgtacagagc
gatatcgaagcgcgtatcgcccagatccgtgcccaggttgccgagacttcttcggactac
gaccgtgaaaaactgcaagagcgcctggccaagctgtccggcggtgttgctgtgatcaag
gtcggtgccggttccgaagttgaaatgaaagagaagaaagcccgcgttgaagacgctctg
cacgcaacccgcgcagctgtcgaagaaggcgtggtgcctggcggtggcgtggcgctgatc
cgtgctctggaggcactgaccgagctcaagggcgacaacgctgatcagaacgtcggtatt
gctgtactgcgtcgcgctgttgaagcgccactgcgtcagatcgttgccaactccggcgac
gagccaagcgtggttgtggataaagtcaagaacggtcgtggcagcttcggctacaacgct
gcgactggcgaatacggcgacatgatcgaaatgggcatcctggaccccaccaaggtgact
cgttcggccctgcaggctgcggcgtcgatcagcggtctgatgctgaccaccgaagcggcg
gtagctgatgcgccgaagaaagatgctcctgctggcggcggcatgccagacatgggcggt
atgggtggtatgggcggcatgatgtaa
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