Pseudomonas agarici: AWM79_09615
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Entry
AWM79_09615 CDS
T11104
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
pagb Pseudomonas agarici
Brite
KEGG Orthology (KO) [BR:
pagb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pagb03009
]
AWM79_09615 (rimO)
Enzymes [BR:
pagb01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
AWM79_09615 (rimO)
Ribosome biogenesis [BR:
pagb03009
]
Prokaryotic type
ribosomal protein modification factors
AWM79_09615 (rimO)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
YajR_YAM
CLP1_P
Matrix_Paramyxo_N
Motif
Other DBs
NCBI-ProteinID:
AMB85541
UniProt:
A0A0X1T0F0
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All DBs
Position
2176456..2177793
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AA seq
445 aa
AA seq
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MSTPTAPANPKVGFVSLGCPKALVDSERILTQLRMEGYDVVSTYQDADVVVVNTCGFIDS
AKAESLEVIGEAIKENGKVIVTGCMGVEEGNIRNVHPSVLSVTGPQQYEQVVNAVHEVVP
PRQDHNPLIDLVPPQGIKLTPRHYAYLKISEGCNHSCSFCIIPSMRGKLVSRPVGDVLDE
AQRLVKSGVKELLVISQDTSAYGVDVKYRTGFWNGAPVKTRMTELCAALASLGVWVRLHY
VYPYPHVDELIPLMAAGKILPYLDIPFQHASPKVLKAMKRPAFEDKTLARIKNWREICPE
LIIRSTFIVGFPGETEEDFQYLLDWLTEAQLDRVGCFQYSPVEGAPANDLGLTVVPDDIK
QDRWERFMAHQQAISSARLQLRIGKEIEVLIDEVDENGAVGRCFFDAPEIDGNVFIDGAG
DLKPGDKVWCRVTDADEYDLWAQTL
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgtccacccccaccgcgccggccaaccccaaggtcggtttcgtatccctgggttgcccc
aaagccctggtcgactccgagcgcatcctcacgcaactgcgcatggaaggctatgacgtc
gtctccacctaccaggacgccgatgtcgtggtggtcaacacctgcggtttcatcgacagc
gccaaggccgagtccctggaagtgatcggtgaagcgatcaaggagaacggcaaggtcatc
gtcaccggctgcatgggtgtggaagaaggcaatatccgcaacgtgcatcccagcgtattg
tccgtgaccggaccgcagcagtacgagcaggtggtcaacgccgtacacgaagtggtgccg
ccacgccaggatcacaatccgctgatcgacctggtgccgccacaaggcatcaagctgacc
ccacgtcactacgcttatctgaagatttccgaaggctgcaaccacagctgcagtttctgc
atcatcccctcgatgcgcggcaagctggtcagccgcccggtcggcgatgtgctcgacgag
gcccagcgtctggtcaagtccggggtcaaggaactgctggtgatctcccaggacaccagc
gcctatggcgtggacgtcaagtaccgcactggcttctggaacggcgccccggtcaagacg
cgcatgaccgagctctgcgcggccctcgccagcctgggcgtgtgggttcgcctgcactat
gtctacccctacccgcacgtcgacgaattgatcccgttgatggccgccggcaaaatcctg
ccgtacctggacatcccgttccagcatgccagcccgaaagttctcaaggcgatgaaacgc
ccggcgttcgaagacaagaccctggcgcggatcaagaactggcgcgaaatctgccccgag
ctgatcatccgttcgacctttatcgttggctttccgggcgagaccgaagaagacttccag
tacctgctcgactggctgaccgaagcccagctcgaccgcgtcggctgcttccagtactcg
ccggtcgaaggcgccccggccaatgacctgggcctgacagtcgtaccggacgacatcaag
caggaccgttgggagcgtttcatggcacatcagcaggccattagctcggcgcgcctgcaa
ctacgcatcggcaaggaaatcgaagtactgatcgacgaagtcgacgagaacggcgccgtc
ggtcgctgcttcttcgacgcgccggaaatcgatggcaacgttttcatcgacggggccggt
gatctcaagccgggcgacaaggtctggtgccgggtgaccgacgccgatgagtacgacctc
tgggcgcaaaccctgtaa
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