Pseudomonas agarici: AWM79_13115
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Entry
AWM79_13115 CDS
T11104
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pagb Pseudomonas agarici
Pathway
pagb03030
DNA replication
pagb03410
Base excision repair
pagb03420
Nucleotide excision repair
pagb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pagb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AWM79_13115
03410 Base excision repair
AWM79_13115
03420 Nucleotide excision repair
AWM79_13115
03440 Homologous recombination
AWM79_13115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pagb03032
]
AWM79_13115
03400 DNA repair and recombination proteins [BR:
pagb03400
]
AWM79_13115
Enzymes [BR:
pagb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AWM79_13115
DNA replication proteins [BR:
pagb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
AWM79_13115
DNA repair and recombination proteins [BR:
pagb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
AWM79_13115
NER (nucleotide excision repair)
GGR (global genome repair) factors
AWM79_13115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
AMB86188
UniProt:
A0A0X1T2B1
LinkDB
All DBs
Position
complement(3010586..3013396)
Genome browser
AA seq
936 aa
AA seq
DB search
MSKAPLVLVDGSSYLYRAFHAMPPLTTSKGLPTGAVKGVLNMLRSLRKQYPDSPFAVVFD
AKGSTFRDEMYADYKANRPSMPDDMRVQIEPLHASVRAMGFALLCVEGVEADDVIGTLAR
GSAAADRPVVISTGDKDMAQLVDEHITLVNTMNETSLDVGGVKAKFGVAPEQIIDLLALM
GDSSDNIPGVKGVGEKTAVALLVGVNGGLKELYANLDLVPSLPIRGAKTLPAKLREHEEM
AFLSYRLATIKVDVPLDIGLDDLHLGEPDREKLAELYATLEFKSWIDELQREAKRAELQA
NAESAPALPEEATQGAVEVTEPASNEPQYETILDQVRFEVWLQKLKDAKLFAFDTETTGV
DAQQAQLVGLSFAVRANEAAYIPLTHSYIGVPDQLDRDNVLLALKPLLEDPEKLKVGQHA
KFDMNILANCAIGGDQSQGITVRGIAFDTMLESYVLNATATRHDMDSLAKKYLEHDTVSF
QDIAGKGAKQLTFDQIALEQAGHYAAEDADVTLRLHQVLHEQLAAIPSLASVLSDIEIPL
VPVLARIERQGALVDKDLLGVQSIELGNKLVELERQAFEIAGEEFNLGSPKQLGVILYEK
LGLPVLKKTGKGQASTAEEVLAKLAEDDYPLPKVLMQYRSMSKLKSTYTDRLPEQINPRT
GRIHTSYHQAVAATGRLSSSDPNLQNIPVRTAEGRRIRQAFVAPKGYKLLAADYSQIELR
IMAHLSKDEGLLNAFRDNLDVHTATAAEVFKVELDDVSPDQRRSAKAINFGLIYGMGAQK
LGKDIGVGTKTAKAYIDVYFARYPGVREYMERTRVQASEQGYVETLFGRRLYLPDIHSNK
PQERAAAERTAINAPMQGTAADIIKKAMVKVDSWLASSGLDAKVILQVHDELVLEVREDL
VAEVSEKIREHMSGAVRLDVPLLVEVGVGNNWDEAH
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagcccctctcgtcctggtggacggctcttcatacctctaccgcgcgtttcac
gcgatgccgccgctcaccacttccaaaggcctgccgaccggcgcggtgaagggcgtcctg
aacatgcttcgcagcctgcgcaagcaatacccggacagcccgtttgccgtggtgttcgac
gccaagggcagcacctttcgcgacgagatgtacgccgattacaaagccaaccgtccgagc
atgcccgatgacatgcgcgtgcagatcgaaccgctgcatgccagcgtccgcgccatgggc
ttcgcgctgttgtgcgtggaaggtgtggaggccgacgatgtcatcggcaccctcgcgcgc
ggcagcgcggcggcggatcgcccggtggtgatctccaccggcgacaaggacatggcgcag
ttggtcgatgagcacattaccctggtcaacaccatgaacgaaacgtccctggacgtaggg
ggcgtgaaggccaagtttggtgtcgcgcccgagcagatcatcgatctgttggctttgatg
ggcgattcttccgataacattcctggggtcaagggcgtgggcgagaagaccgccgtcgcc
ctgctggtgggggtcaacggtggcctgaaagagctctatgccaatctcgacctggtgccg
agcctgccgatccgtggggcgaaaaccctaccggccaagctgcgcgaacacgaggagatg
gcgttcctgtcctatcggctggcaacgatcaaggtcgatgtgccgctggatatcgggctc
gatgacctgcacctcggcgagccagaccgggaaaagctagctgagctgtatgccacgctg
gagttcaagagctggatcgacgagttgcagcgtgaggccaagcgtgccgagctccaggcc
aatgccgagtctgccccggcgctgcccgaggaggccacccagggcgcggtcgaagtgacg
gagccggcttccaacgaaccgcagtacgaaaccatcctggatcaggtgcgcttcgaggtc
tggctgcagaagctcaaggacgccaagctgttcgccttcgataccgaaaccaccggggtc
gatgcccagcaggcgcagttggttgggctctcctttgccgtgcgggccaatgaagcggcc
tatatcccgctgacccactcctatatcggcgtgccggaccaactggaccgcgacaacgtg
ctgctggccttgaagccgttgctggaagatccggaaaaactcaaggtcggccagcacgcc
aagttcgacatgaatatcctggccaattgcgccatcggtggcgatcagtcacagggcatc
accgtgcgcggtattgccttcgacaccatgctcgaatcctatgtgctgaacgccaccgcg
acccgccacgacatggacagcctggcgaagaagtaccttgagcatgacacggtcagcttc
caggacatcgccggcaagggcgccaaacaactgaccttcgaccagattgccctggaacag
gccggtcactatgcagcagaagacgccgatgtgaccctgcgcctgcaccaggtgctgcat
gagcaacttgcggcgatcccgagcctggccagcgtgctgagcgatatcgagataccgttg
gtgccggtgctggctcggatcgagcgccagggtgccctggtcgacaaggacctgctgggc
gtgcagagcatcgagctgggcaacaagttggtcgagctggagcgccaggcgttcgagatc
gccggtgaggagttcaatctcgggtcgcccaagcagttgggggttattctctacgagaaa
ctcggcctgccggtgttgaagaagaccggcaagggccaggcttccactgccgaggaggtc
ctcgccaagctggccgaagacgactatccgctacccaaggtgctgatgcagtaccgctct
atgagcaaactcaagagtacctacaccgatcgcctgccggagcagatcaatccgcgcacc
gggcgtatccacacctcttatcaccaggccgtggccgctaccgggcgcttgtcctccagc
gatccgaacctgcagaacattcccgtgcgcaccgctgaggggcggcggattcgccaggca
tttgtcgcgcccaagggctacaagttgctggcggcggactattcgcagatcgagttacgg
atcatggcgcacctgtcgaaggacgaaggcctgctcaatgccttccgcgacaacctcgac
gtgcatacggctacggcggccgaggtgttcaaggtcgagttggacgacgtcagccccgat
cagcgacgtagtgccaaggcgatcaacttcggcctcatctatggcatgggcgcacaaaaa
ctgggcaaggacatcggcgtcggcaccaagaccgccaaggcctatatcgatgtctatttt
gcccgttaccctggggttcgcgagtatatggagcgtactcgcgtccaggcgtcggagcag
ggctatgtcgagaccttgttcggtcgccggctgtatctgccggatattcattccaacaag
ccccaggagcgcgcggcggccgagcgcaccgcgatcaacgcgccaatgcagggcaccgcg
gcggacatcatcaagaaggcgatggtcaaagtggatagctggctggccagttcaggactg
gacgccaaggtcattctccaggtacacgacgaactggtgctcgaagtacgcgaggatctg
gtagccgaggtcagcgagaagattcgcgaacacatgagcggtgcggtgcgactggatgtg
ccgctgctggtggaggtcggagtgggcaacaactgggacgaggcgcactga
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