Pseudomonas agarici: AWM79_15575
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Entry
AWM79_15575 CDS
T11104
Name
(GenBank) Crp/Fnr family transcriptional regulator
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
pagb Pseudomonas agarici
Pathway
pagb02020
Two-component system
pagb02024
Quorum sensing
pagb02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pagb00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AWM79_15575
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AWM79_15575
02025 Biofilm formation - Pseudomonas aeruginosa
AWM79_15575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pagb03000
]
AWM79_15575
Transcription factors [BR:
pagb03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
AWM79_15575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_Crp_2
cNMP_binding
Rrf2
DUF7528
MarR_2
Motif
Other DBs
NCBI-ProteinID:
AMB86648
UniProt:
A0A0X1T3L6
LinkDB
All DBs
Position
complement(3561711..3562397)
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AA seq
228 aa
AA seq
DB search
MDVSAWRSRLLTGHWFSNLPAYLQDSLLVTAKGRRLTPGQCLFKRGDPPCGLYAVLEGSV
RVGAVSAKNKVAPPSRIELPYWFGEISLFDGLPRTHDAYAVGHTILLHVRQSVLLELLQE
HPEYWRHFALLMSQKLCLTFIGLEQLSRLPATVRLAHWLLLIAEGYGELNQSRQLIPLAQ
DQLAAMLSLSRQSSRQIFQGLQDEGIIELNRGEIEILDLERLRAAASA
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atggacgtatctgcctggcgctcgcgcctgctgacggggcactggttcagcaacctgcct
gcttacctgcaggatagcttgttggtcacggccaaggggcggcgcctgacgccggggcag
tgtctgttcaagcgcggtgacccgccgtgcggcctgtatgcggtcctcgaaggctcggta
cgagtcggtgccgtcagcgcaaaaaacaaggtggcgccgccgagccggatcgaattgccg
tactggttcggcgagatttccctgttcgatgggttgccgcgcacccatgatgcctacgcg
gtaggccacaccatcctgctacacgtgcgccagagtgtcttgttggagctgctccaggag
cacccggaatattggcggcattttgctttgctgatgagccagaagctgtgcctgaccttt
atcggcctggaacagttgagccggttgccggctaccgtgcgcctggcgcattggttgctg
ctgatcgccgaaggttatggtgagctcaatcagtcgcggcaactgatcccgctggcccag
gaccaactggcggcgatgctgtcgctgtcgcgccagagcagccggcagattttccagggc
ctgcaggacgagggcatcatcgagctgaaccggggtgaaatcgagattctcgacctggag
cgcctgcgggcggcggcgagtgcctga
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