Pseudomonas agarici: AWM79_16420
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Entry
AWM79_16420 CDS
T11104
Name
(GenBank) peptide ABC transporter substrate-binding protein
KO
K12368
dipeptide transport system substrate-binding protein
Organism
pagb Pseudomonas agarici
Pathway
pagb02010
ABC transporters
pagb02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
pagb00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
AWM79_16420
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
AWM79_16420
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pagb02000
]
AWM79_16420
Transporters [BR:
pagb02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Dipeptide transporter
AWM79_16420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
SBP_bac_3
Motif
Other DBs
NCBI-ProteinID:
AMB86797
UniProt:
A0A0X1T3W5
LinkDB
All DBs
Position
complement(3730839..3732434)
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AA seq
531 aa
AA seq
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MKMLPLRAAIAATLLTAAIGVSAKPLVVCTEASPEGFDPVLYTTAVTSDASSETVFNRLV
DFKPGTAEIQPALAESWETSPDGLQYTFHLRKGVKFHNTDYFKPTRELNADDVIWSFQRQ
LDPNHPWHKQSSVGFPYFESMDFQNLLKSVEKIDDLTVRFTLSRPEAPFLLDLGMAFTSI
HSAEYADQLLKAGKMDDLNAKPIGTGPFIFQRYAKDAQVRYKANPDYFRGKPPADALIFA
ITPDNNTRLQKLKANECQVALYPKPDDVPSIQADPNLQVVGMAAMSTGYIAINTEHKYLG
DVRVRQAIELALDKQTYVDTLYGKGNAIAAVNPYPPTLLGYNDKLKNPAQNLDKARALLK
EAGVPQGTVFTLYTRNAGGPTNPNPQLGAQLVQSDLAKVGIKIDIRVMEWAEMLKRAKKG
EHDLVSAGWSGDNGDPDNFLTPLLSCEAAKNGENYTRWCNPQFQTLIDQARTKTEPAERA
ALYEQALEILHQQVLWVDHAHPKMFTAMRKNVVGYHMNPLTTNNFATTQVK
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgcttcccttgcgagcggctatcgcagccaccttgctgaccgccgccatcggc
gtttcggcgaaacccttggtggtctgcaccgaagccagtccggaaggtttcgatccggtt
ctttacaccaccgccgtcacttccgacgcctcgtctgaaaccgtgttcaaccgcctggtg
gacttcaagccaggcaccgccgagatccagccggccctggctgaaagctgggaaaccagc
cccgacggcctgcagtacacgttccacctgcgcaaaggcgtcaagttccacaacaccgac
tacttcaaaccgactcgcgagctgaatgccgacgacgtgatctggagcttccagcgccaa
ctggatccgaatcacccctggcacaagcaatcgagtgtcggtttcccctactttgaaagc
atggacttccagaacctgctcaagagcgtcgaaaaaatcgacgacttgaccgtcaggttc
accctgtcccgacccgaggcaccgttcctgctcgacctgggtatggccttcacctcgatc
cactccgccgagtatgccgaccagctgctcaaggccggcaagatggacgacctgaatgcc
aagccaatcggcaccggcccgttcattttccagcgttatgccaaggatgcccaggtccgc
tacaaggccaacccggactacttccgtggcaaaccgcccgccgatgcactgatatttgcc
attaccccggacaacaacacgcgcctgcagaagctcaaggccaacgagtgccaggtcgcc
ctgtacccaaaaccggatgacgtcccgagcatccaggccgatccgaacttgcaggtcgtc
ggcatggctgccatgtccaccggttacatcgccatcaataccgagcacaagtacctgggt
gatgtgcgagtgcgccaggccatcgaattggcgctggacaagcagacctatgtcgatacc
ctgtatggcaagggcaacgccatcgcggcggtcaacccctacccgcccaccctgctgggc
tacaacgacaagctgaagaacccggcgcagaacctggacaaggcccgtgcgctgctcaag
gaagccggcgtgccgcaaggcacggtcttcaccctgtacactcgcaatgcgggcggccca
accaacccgaacccgcaactgggcgcgcagttggtccagtcggatttggccaaggtcggt
atcaagatcgatatccgcgtcatggagtgggccgagatgctcaagcgcgcaaaaaaaggc
gaacatgacctggtgtccgccggttggagcggcgacaacggcgacccggataacttcctc
actccgctattgagttgcgaagcggccaaaaacggcgaaaactacacccgctggtgcaac
ccgcaattccaaaccctgatcgaccaggctcgtaccaagaccgagccggccgaacgtgca
gcgctctatgaacaagccctggaaatcttgcatcagcaagtactgtgggtcgaccatgct
caccccaagatgtttaccgccatgcgcaagaacgtagtgggttatcacatgaacccactg
accaccaataacttcgccacgacccaggtgaagtag
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