Pseudomonas agarici: AWM79_18250
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Entry
AWM79_18250 CDS
T11104
Name
(GenBank) penicillin-binding protein 1B
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
pagb Pseudomonas agarici
Pathway
pagb00550
Peptidoglycan biosynthesis
pagb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pagb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
AWM79_18250
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pagb01003
]
AWM79_18250
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pagb01011
]
AWM79_18250
Enzymes [BR:
pagb01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
AWM79_18250
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
AWM79_18250
Glycosyltransferases [BR:
pagb01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
AWM79_18250
Peptidoglycan biosynthesis and degradation proteins [BR:
pagb01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
AWM79_18250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
UB2H
Transpeptidase
UvrB_inter
Motif
Other DBs
NCBI-ProteinID:
AMB87136
UniProt:
A0A0X1T4T6
LinkDB
All DBs
Position
complement(4137488..4139812)
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AA seq
774 aa
AA seq
DB search
MTRTRSPRSKLKPASRGLRPWLGWVLKLSLVGLVVLAGFAIYLDAVVQEKFSGKRWTIPA
KVYARPLELFVGQKLSKADFLTELDALGYRREAVVNGPGAAAVNGNTVDLNTRGFQFYEG
MEAAQPVRVRFSGDYVAELSALNGSKLSVVRLEPLLIGGLYPKNLEDRILIKIDQVPPYL
LDTLVTVEDRDFYHHFGVSPKSIARAIWVNTSAGQMRQGGSTLTQQLVKNFFLTNERSLS
RKLTEAMMALLLELHYDKKEILEAYLNEVFIGQDGQRAVHGFGLASQFFFSQPFAELKLH
QVALLVGMVKGPSYYNPRRYPERALERRNLVLDLLAQQGVVPVEQVEAAKKMPLGVTQRG
SLADSSFPGFLDLVKRQLREDYRDEDLTEEGLRIFTSFDPILQMKAEASVNETFKRLAGR
KGSEDVEAAMVVTNPETGEVQAMIGSRQPGFAGFNRALDAVRNIGSLIKPAVYLTALEKP
SQYTLTSWLSDEGFSVKGADGQVWKPQNFDRRSHGTVFLYQGLAHSYNLSTARLGLEVGV
PSVLKTVARLGITREFPAYPSILLGAGGMTPMEVATMYQTIANGGFNTPMRGIRSVLTGE
GEPLKRYPFQIQQRFDPGSIYLIQAAMQRVMREGTGASAYNVLPRTLTLAGKSGTSNDSR
DSWFSGFSQDLLAVVWLGRDDNGKTPFTGATGALQVWTSFMKKADPLPLDMPQPDNIVQA
WVDQHTGQGSDANCPGAVQMPYIRGSEPALGAACGGAVPAPATEVMDWVKGWLN
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgactcgtactcgatccccgcgttccaaactcaaacctgcctcccgcggccttcgtccc
tggctcggttgggtgctcaagctcagtctggtcggccttgtggtgctggccggcttcgcc
atttacctcgatgccgtggtgcaggagaagttctccggcaagcgctggactattccggcc
aaggtctatgcccggccgttggagctgttcgtcggccagaaactgagcaaggcggatttc
ttgactgaactcgatgcccttggctatcgccgcgaggcggtggtcaacggtccgggagcg
gcggcggtcaatggcaacacggtcgacctgaatacccgtggcttccagttttacgagggc
atggaagcggcgcagccagtgcgtgtgcgtttctccggcgactatgtcgccgaactgtcg
gcgctcaatggctcgaaactctcggtagtgcggcttgagccgttgctaatcggtggcctg
tacccgaaaaatctcgaggatcggatcctgatcaagatcgatcaggtgccgccctatttg
ctcgataccctggtgaccgtcgaggatcgggatttctatcatcatttcggtgtttcgccg
aagtcgattgcccgggcgatctgggtcaatacttcggcgggccagatgcgccaaggcggt
agtacattgacccagcaattggtgaagaacttcttcttgaccaacgaacgcagcctgagt
cgcaagctcacggaggccatgatggccttgctgctggaactgcactacgacaagaaagag
attctcgaagcctatctcaacgaagtctttatcggccaggacggccagcgcgccgtgcac
ggtttcggcctggcgagccagttcttcttcagccagccgtttgccgaattgaagctgcat
caggttgcgttgctggtggggatggtcaaggggccgtcctactacaatccgcgtcgttat
cccgagcgtgccctcgaacggcgtaacctggtgctcgatctattggcgcagcagggggtg
gtgcctgtcgaacaggtcgaggcagcgaagaagatgccgctgggcgtcacccagcgcggc
agcctggccgacagctcgttccccggttttctcgatctggtcaagcgtcagttgcgcgaa
gactatcgcgacgaagatttgaccgaggaggggctgcggattttcaccagcttcgatccg
atcttgcagatgaaggccgaagcctcggtcaatgaaacgttcaagcgtctggccggtcgc
aagggttcggaggatgtcgaagcggcgatggtagtgaccaacccggaaaccggtgaagtc
caggctatgatcggcagtcgtcagcccggtttcgccggcttcaaccgggcgctggatgcg
gtacgcaatatcggctcgctgatcaagccggcggtttatctgaccgcactggaaaaaccg
agccagtacacgctgaccagttggttgtcggatgaaggtttctcggtgaaaggcgcggat
ggccaggtctggaaaccgcagaacttcgatcgccgttcccacggcacggttttcctgtat
caagggctggcgcactcctacaatctgtcgacggcacgcctgggtctggaggtcggtgtc
ccgagcgtactcaagacggtcgcccgattagggattacccgtgagtttcccgcttatcca
tcgatattgctgggggccggtggcatgaccccaatggaagtggcaaccatgtaccagacc
atcgccaacggcggcttcaatacgccgatgcgcggtatccgcagcgtcttgacgggcgag
ggcgaaccgctcaagcgctacccgttccagatccagcaacgcttcgatccgggctcaatc
tatctgattcaggcggcgatgcagcgggtgatgcgtgagggtactggggccagtgcctac
aatgtgctgccaagaaccctgacattggcgggcaagtccggcaccagtaacgactcccgt
gacagttggttctccggtttcagccaggacctgctggcggtggtctggctggggcgcgac
gacaacggcaagacgccgtttaccggcgccaccggtgccttgcaggtctggaccagtttc
atgaagaaagccgatccgctgccgctggacatgccacaaccggataatatcgttcaggcc
tgggtcgatcagcacaccgggcagggctccgatgccaattgcccgggcgcggtgcagatg
ccgtatattcgcggtagtgaacccgctctaggtgcggcttgtggtggtgcggtgcctgcg
ccggccaccgaagtgatggattgggtcaagggctggttgaattaa
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