Pseudomonas agarici: AWM79_19825
Help
Entry
AWM79_19825 CDS
T11104
Name
(GenBank) lipid A export permease/ATP-binding protein MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
pagb Pseudomonas agarici
Pathway
pagb02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pagb00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
AWM79_19825
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pagb02000
]
AWM79_19825
Enzymes [BR:
pagb01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
AWM79_19825
Transporters [BR:
pagb02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
AWM79_19825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
ABC_ATPase
AAA_16
AAA_29
DEAD
RsgA_GTPase
AAA_30
nSTAND3
NB-ARC
AAA_24
nSTAND1
SRTM1
Motif
Other DBs
NCBI-ProteinID:
AMB87421
UniProt:
A0A0X1T5S3
LinkDB
All DBs
Position
complement(4507724..4509529)
Genome browser
AA seq
601 aa
AA seq
DB search
MTDSRLSASPSSLKIYLRLLSYVRPYAGLFALSILGFLIFASTQPMLGYILKYFVDGLSN
PQASLFPSVPYLRDLQLLQAVPLLIVLIAGWQGLGSYLGNYFLAKVSLGLVHDLRVQLFN
NLLTLPNRYFDSHNSGHLISRITFNVTMVTGAATDAIKVVIREGMTVVFLFLSLLWMNWR
LTLVMIAILPLIAVMVSSSSKKFRKQSKRIQVAMGDVTHVASETIQGYRVVRSFGGEAYE
RQRFLEASQGNTDKQLRMTRTGAIYTPLLQLVIYSAMAVLMFLVLFLRGDASAGDMIAYI
TLAGLLPKPIRQLSEVSSTIQKGVAGAESIFEQLDVESEVDGGTIEREAVSGRLEVRNLS
FTYPDTDRQVLSDISFTVEPGQMIALVGRSGSGKSTLAALIPRFYHHDTGEILLDGVEIE
DYRLLNLRRHIAQVTQHVTLFSDTVANNIAYGDLAGAPRADIEAAAADAYAKEFIEQLPQ
GFDTQVGENGVLLSGGQRQRLAIARALLKNAPLLILDEATSALDTESERHIQAALDQAMK
GRTTLVIAHRLSTIEKADLILVMDQGRIVERGSHAQLLAQNGYYARLNAMGLDDPAPVDI
V
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgaccgactcccgtctcagcgcaagcccttcgagcttgaagatatacctccgtttactc
agttatgtccggccttacgcgggtctgttcgcgttgagtatcctcgggttccttatattc
gcttcgacccagccgatgcttggctacatcctcaagtatttcgtcgacggcctgtccaat
ccccaggcctcgctgttccccagcgttccctacctgcgcgacttgcaactgctgcaggcg
gtgccgctgctgatcgtgctgattgccggctggcaaggactcgggtcctatctgggcaac
tactttctggcgaaggtgtcgttaggattggtgcatgatcttcgggtgcagttgttcaat
aacctgctgaccttgcccaaccgctatttcgacagccacaactccggtcatctgatctcg
cgtatcactttcaatgtgaccatggtcaccggggcggccacggatgcaatcaaggtggtg
atccgcgaaggcatgaccgtggtgtttctgtttctttcgttgctgtggatgaactggcgt
ctgacgctggtcatgatagcgatactgccgctgatcgcagtgatggtcagctcctcgagc
aagaaatttcgtaagcagagcaagcgtatccaggtcgcaatgggtgatgtcacccatgtc
gcctcggagaccatccagggttatcgtgtagtgcgcagcttcggtggcgaggcctatgaa
cggcagcgattcctcgaggccagccagggcaataccgacaaacaactgcgcatgactcgt
accggagcgatctacactccattgctgcaactggtgatctacagtgccatggcggtgttg
atgttcctggtgttgtttctgcgtggcgatgcttctgcaggcgacatgattgcctatatc
actttggctgggttgttgcctaagccgattcgccagctctccgaagtcagttcgaccatc
cagaaaggtgtcgcgggggctgaaagcattttcgagcagttggatgtcgagtccgaagtg
gacggcggcaccattgagcgtgaagcggtcagcggtcgcctggaagtgcgtaatctgagc
ttcacttatccggataccgatcggcaggtcttgagtgatatcagctttaccgtcgagccg
ggccagatgatcgctttggttgggcgctctggtagtggcaagtcgacgctggcggccctg
attcctcgtttctatcatcatgatacgggtgaaattcttctcgacggtgtcgagatcgaa
gattatcgcctgttgaacttgcgtcggcacattgcccaggtgacccagcatgtcacgttg
ttcagcgataccgtggccaataatattgcctatggggacctggcgggcgctcctcgtgct
gatatcgaggccgccgccgccgatgcctatgcaaaagagttcatcgagcagttgccccag
ggcttcgatacccaggtaggcgaaaacggcgtgttgctgtctggcggccagcgccagcgc
ctggcgattgcccgcgctttactcaaaaatgcgccgttgttgattctcgacgaggcgacc
tcggccctcgacaccgagtcggagcggcatatccaggcagcgctggaccaggccatgaag
gggcgcactacgctggtgatcgctcaccgactttcgaccatcgagaaagccgatctgatc
ctggtcatggatcaggggcgtattgtcgagcggggtagtcatgcccaactgttggcgcag
aacggctactatgcgcggctcaacgccatggggctcgatgatccggctcctgttgacatt
gtttga
DBGET
integrated database retrieval system
