Pseudomonas agarici: AWM79_21095
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Entry
AWM79_21095 CDS
T11104
Name
(GenBank) type VI secretion protein
KO
K11893
type VI secretion system protein ImpJ
Organism
pagb Pseudomonas agarici
Pathway
pagb02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pagb00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
AWM79_21095
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pagb02044
]
AWM79_21095
Secretion system [BR:
pagb02044
]
Type VI secretion system
Imp/Vas secretion system core components
AWM79_21095
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
T6SS_VasE
Motif
Other DBs
NCBI-ProteinID:
AMB87647
UniProt:
A0A0X1T6D5
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Position
complement(4816036..4817367)
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AA seq
443 aa
AA seq
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MSLLPDAVCWYEGMQLLPQHFQLQGLRGEALAAHLVQAGNPWFWGVEQLEIDPSALCAGQ
VRILSLQATFPDGLPVSLDAADGARLELEVGEAIDNSTQSMVTVYLAVTPLWRAGQLREL
QGRLQSLTSEALPDLTSGQNPQPVTVWRPNPHLCTDTQRADSICLPLLRIRKEGGGFVQV
PYVPPSPRLLPESPLGRRVAALCARAREKCLFLAGRLRQAQQAGSQEDAAQIRRQLGALW
ARLPEVEGLLNSRIATPQALHGVLLGMAGGWSLLDPLAGVPAFMPLDYLDLRRGYEEVLN
WLELDLELIRVGYRCLPFEQTGEMFSLQLPERQPRQRLVIGLRMPAGAGESAAIEWLERT
IIASDSHLTVLARQRMPGLRHHVMSRQEQVAYSVGSDTRLFVVEAEGEWFDPEQPLRIIA
PASKLAINPWQIVLFVEQASEAS
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgagtctgttacctgatgcggtctgctggtacgagggtatgcaattgctgccccagcac
ttccagttgcagggcctgcgaggcgaagccctggccgcgcacttggtccaggcgggcaat
ccgtggttctggggggtcgaacaactggagatcgatccctccgcgctgtgtgccgggcag
gtgcgtatcctgtccctgcaagccacctttcccgacggcttgccggtgagcctcgacgcc
gccgacggcgcgcgccttgaattggaggtcggcgaggctatcgataactcgactcagtcg
atggtcacggtctacctggcggttacgccgctctggcgggctgggcaattgcgcgagctc
caggggcgcctgcaatcgctgaccagcgaggcgttgccggacttgaccagtggacagaac
ccgcaaccggtcacggtctggcggccgaatccgcacctgtgcaccgacacccaaagggcc
gattcgatctgtttgccgctgctgcgtatccgtaaggagggcggcggtttcgttcaggtg
ccctatgtcccgcctagcccaagattgctgccggagtcgcccttggggcggcgggtggcg
gcactgtgtgcgcgggcccgggaaaagtgtctgtttctcgccggccgcctgcgccaggca
cagcaggcgggcagtcaggaggatgccgcgcaaatccgccgtcaactgggtgcgctctgg
gctcgcctgccggaagtcgaaggcctgctgaatagccgcatcgccacccctcaagcgctg
cacggggtgttgttggggatggcggggggctggtcgctgctcgatccgctggccggggtg
ccggcgttcatgccgctggattacctggatctgcgacgcggttacgaagaggtactgaac
tggcttgaactggacctggaactgatccgtgtcggttatcgctgcctgccgttcgagcag
accggtgaaatgttctccctgcaactgcccgagcgccagccccggcagcgtctggtgatc
ggcctgcgaatgcctgctggcgccggcgaaagcgcggcgatcgaatggttggagcgcacc
atcattgcctccgacagccacctgaccgtgctggcccgacaacgcatgcccggactacgt
caccacgtcatgagtcgccaggaacaagtagcctacagcgtcggcagcgacacccggctg
tttgtcgtcgaggccgagggcgagtggttcgatcccgaacaaccgctgcgtattatcgcg
ccagcctcgaagctggcgatcaacccgtggcagatcgtcctgttcgtcgagcaggccagt
gaagcatcgtag
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