Pseudomonas agarici: AWM79_21495
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Entry
AWM79_21495 CDS
T11104
Name
(GenBank) transposase
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pagb Pseudomonas agarici
Pathway
pagb03030
DNA replication
pagb03430
Mismatch repair
pagb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pagb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AWM79_21495
03430 Mismatch repair
AWM79_21495
03440 Homologous recombination
AWM79_21495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pagb03032
]
AWM79_21495
03400 DNA repair and recombination proteins [BR:
pagb03400
]
AWM79_21495
Enzymes [BR:
pagb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AWM79_21495
DNA replication proteins [BR:
pagb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AWM79_21495
DNA repair and recombination proteins [BR:
pagb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AWM79_21495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
BRCT
Motif
Other DBs
NCBI-ProteinID:
AMB87722
UniProt:
A0A0X1T724
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All DBs
Position
4908223..4909071
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AA seq
282 aa
AA seq
DB search
MDFVVIDVETANPDLASICQVGIAVFSNGQFSESWSTLVNPNDYFDSHNVSVHGINEEMV
ASAPHWIEVHDRLRANFSNQILASHTPFDRTAIRRACEKSSTTSLDCQWLDTARVVRRTW
PIFSQSGYGLANVAAHFGISFKHHDAEEDARAAGEILLRAIQETGSSAADWCSLALRPTA
SLASSEVRTANPDGPLFGDVVVFTGSLSISRQEAANVASLAGCNVATGVTKHTTLLVVGD
QDIRMLAGAEKSAKHRKAEELMAKGQKIRILGESDFGHLIGV
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atggatttcgtagtcattgacgttgaaaccgccaatccagaccttgcaagcatctgccaa
gttggcatcgccgttttctcaaacggacaattctcagagtcatggagcacgctcgttaat
ccaaatgactactttgattctcacaacgtttcagttcacggcataaatgaggaaatggtt
gcatcggcaccgcattggatagaagtacatgatcgcctgcgagccaatttctctaatcaa
atattggctagccatacgccattcgacagaactgcaattcgtagggcctgtgaaaagtct
tcaacaacctcacttgattgccagtggcttgatacggcgcgagttgttaggcgcacttgg
cctattttttcgcagtctggttatgggcttgcaaatgttgccgctcacttcggcataagc
ttcaagcatcacgatgcagaagaggatgcgcgtgctgcgggtgaaatattacttagagca
attcaggaaactggttcaagtgccgccgattggtgctctttggcattgcgaccaactgct
tcattagcatcctccgaggttcgcaccgccaatccagacggcccactattcggtgatgtg
gttgtgttcaccggatcactttcaatatcgcgccaagaagctgccaatgttgcatcgtta
gcaggctgcaatgtcgcaactggcgtcacgaaacataccactctgcttgttgtcggcgac
caagacattcgcatgctggctggcgcagaaaagagcgctaagcataggaaggccgaagaa
ctcatggctaaaggccagaaaattcgcatactcggggaaagcgactttggccacctcatt
ggtgtgtag
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