KEGG   Pseudomonas agarici: AWM79_22500
Entry
AWM79_22500       CDS       T11104                                 
Name
(GenBank) DNA repair protein RadA
  KO
K04485  DNA repair protein RadA/Sms
Organism
pagb  Pseudomonas agarici
Brite
KEGG Orthology (KO) [BR:pagb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pagb03400]
    AWM79_22500
DNA repair and recombination proteins [BR:pagb03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     AWM79_22500
SSDB
Motif
Pfam: ATPase AAA_25 Zn_ribbon_LapB ChlI Lon_C AAA_16 DnaB_C AAA_22 GvpD_P-loop AAA RecA SLFN-g3_helicase DUF7125 AAA_14 nSTAND3 NTPase_1 Rad51 AAA_24 ABC_tran MCM AAA_5 PAXNEB DUF7129
Other DBs
NCBI-ProteinID: AMB87895
UniProt: A0A0X1T709
LinkDB
Position
5141775..5143142
AA seq 455 aa
MAKAKRMYGCTECGATFPKWAGQCGECGAWNTLSETLVESGGAAAPSGRTGWAGQQAQIK
TLAQVSVEEMPRFSTASGELDRVLGGGLVEGSVVLIGGDPGIGKSTILLQTLCNLATRMP
ALYVTGEESQQQVAMRARRLGLPQDQLRVMTETCIETIIATARVEKPKVMVIDSIQTIFT
EQLQSAPGGVSQVRESAALLVRYAKQSGTAIFLVGHVTKEGALAGPRVLEHMVDTVLYFE
GESDGRLRLLRAVKNRFGAVNELGVFGMTDRGLKEVSNPSAIFLTRAQEEVPGSVVMATW
EGTRPMLVEVQALVDDSHMANPRRVTLGLDQNRLAMLLAVLHRHGGIPTHDQDVFLNVVG
GVKVLETASDLALMAAVMSSLRNRPLPHDLLVFGEVGLSGEVRPVPSGQERLKEAAKHGF
KRAIVPQGNAPKEAPPGLKVIAVTRLEQALDALFE
NT seq 1368 nt   +upstreamnt  +downstreamnt
atggccaaggccaagcgcatgtacggctgtaccgagtgcggcgcgacctttcccaagtgg
gcgggccagtgcggcgaatgtggtgcctggaataccctgagcgaaaccctggtggaaagc
ggtggcgcggcggcgcccagcggccgcaccggttgggccgggcagcaggcgcagatcaag
acgttggcgcaggtcagcgtcgaggagatgccacgtttctccaccgcctccggtgaactg
gatcgcgtgctcggcggcggcctggtggagggctcagtggtgttgatcggtggcgatccc
ggcatcggcaagtcgaccatcctcttgcagaccctgtgcaacctcgctacgcgcatgccg
gcgctgtacgtcaccggcgaagagtcgcagcaacaggtggcgatgcgcgcgcgtcgcttg
gggctgccccaggatcaactacgggtgatgaccgaaacctgtatcgaaaccatcatcgct
accgctcgggtggaaaaacctaaagtcatggtgatcgactcgatccagacgattttcacc
gagcaactgcaatcggcaccgggcggagtgtcccaggtgcgcgaaagtgcggccttgctg
gtgcgttacgccaagcagagcggcacggcgatcttcctggtcgggcacgtgaccaaggag
ggcgccctggcggggccgcgcgtactcgaacatatggtcgataccgtgctgtacttcgaa
ggtgagtccgacggtcgcctgcgtctgctgcgggcggtaaaaaatcgtttcggcgcagtg
aacgagttgggagtattcggcatgaccgaccggggactgaaggaggtctccaatccgtcg
gcgatttttctcacccgagcccaggaggaagtgcctggcagtgtggtcatggccacctgg
gaaggtacccggccaatgttggtggaagtccaggccctggtcgacgacagccatatggcc
aaccctcggcgagtgaccctcgggctggaccagaatcgcctggcgatgctgttggcggtg
ctgcaccgccatggtggtattcctacccatgaccaggatgtatttctcaacgtcgtcggt
ggcgtgaaagtattggagaccgcctccgacctggcgctgatggcggcggtgatgtccagc
ttgcgcaatcgaccgctgccccatgatttgctggtgttcggcgaggtcggcctgtccggc
gaggtgcgtccggtgcccagtggccaggagcggctcaaggaagcggccaagcacggtttc
aagcgcgctatcgtgccccagggcaatgcgccgaaagaggcgccgccggggctgaaagtc
attgccgtcacgcgcctggaacaggcgttggatgcattgttcgaataa

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