Pseudomonas agarici: AWM79_22500
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Entry
AWM79_22500 CDS
T11104
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
pagb Pseudomonas agarici
Brite
KEGG Orthology (KO) [BR:
pagb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pagb03400
]
AWM79_22500
DNA repair and recombination proteins [BR:
pagb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AWM79_22500
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
Lon_C
AAA_16
DnaB_C
AAA_22
GvpD_P-loop
AAA
RecA
SLFN-g3_helicase
DUF7125
AAA_14
nSTAND3
NTPase_1
Rad51
AAA_24
ABC_tran
MCM
AAA_5
PAXNEB
DUF7129
Motif
Other DBs
NCBI-ProteinID:
AMB87895
UniProt:
A0A0X1T709
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All DBs
Position
5141775..5143142
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AA seq
455 aa
AA seq
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MAKAKRMYGCTECGATFPKWAGQCGECGAWNTLSETLVESGGAAAPSGRTGWAGQQAQIK
TLAQVSVEEMPRFSTASGELDRVLGGGLVEGSVVLIGGDPGIGKSTILLQTLCNLATRMP
ALYVTGEESQQQVAMRARRLGLPQDQLRVMTETCIETIIATARVEKPKVMVIDSIQTIFT
EQLQSAPGGVSQVRESAALLVRYAKQSGTAIFLVGHVTKEGALAGPRVLEHMVDTVLYFE
GESDGRLRLLRAVKNRFGAVNELGVFGMTDRGLKEVSNPSAIFLTRAQEEVPGSVVMATW
EGTRPMLVEVQALVDDSHMANPRRVTLGLDQNRLAMLLAVLHRHGGIPTHDQDVFLNVVG
GVKVLETASDLALMAAVMSSLRNRPLPHDLLVFGEVGLSGEVRPVPSGQERLKEAAKHGF
KRAIVPQGNAPKEAPPGLKVIAVTRLEQALDALFE
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggccaaggccaagcgcatgtacggctgtaccgagtgcggcgcgacctttcccaagtgg
gcgggccagtgcggcgaatgtggtgcctggaataccctgagcgaaaccctggtggaaagc
ggtggcgcggcggcgcccagcggccgcaccggttgggccgggcagcaggcgcagatcaag
acgttggcgcaggtcagcgtcgaggagatgccacgtttctccaccgcctccggtgaactg
gatcgcgtgctcggcggcggcctggtggagggctcagtggtgttgatcggtggcgatccc
ggcatcggcaagtcgaccatcctcttgcagaccctgtgcaacctcgctacgcgcatgccg
gcgctgtacgtcaccggcgaagagtcgcagcaacaggtggcgatgcgcgcgcgtcgcttg
gggctgccccaggatcaactacgggtgatgaccgaaacctgtatcgaaaccatcatcgct
accgctcgggtggaaaaacctaaagtcatggtgatcgactcgatccagacgattttcacc
gagcaactgcaatcggcaccgggcggagtgtcccaggtgcgcgaaagtgcggccttgctg
gtgcgttacgccaagcagagcggcacggcgatcttcctggtcgggcacgtgaccaaggag
ggcgccctggcggggccgcgcgtactcgaacatatggtcgataccgtgctgtacttcgaa
ggtgagtccgacggtcgcctgcgtctgctgcgggcggtaaaaaatcgtttcggcgcagtg
aacgagttgggagtattcggcatgaccgaccggggactgaaggaggtctccaatccgtcg
gcgatttttctcacccgagcccaggaggaagtgcctggcagtgtggtcatggccacctgg
gaaggtacccggccaatgttggtggaagtccaggccctggtcgacgacagccatatggcc
aaccctcggcgagtgaccctcgggctggaccagaatcgcctggcgatgctgttggcggtg
ctgcaccgccatggtggtattcctacccatgaccaggatgtatttctcaacgtcgtcggt
ggcgtgaaagtattggagaccgcctccgacctggcgctgatggcggcggtgatgtccagc
ttgcgcaatcgaccgctgccccatgatttgctggtgttcggcgaggtcggcctgtccggc
gaggtgcgtccggtgcccagtggccaggagcggctcaaggaagcggccaagcacggtttc
aagcgcgctatcgtgccccagggcaatgcgccgaaagaggcgccgccggggctgaaagtc
attgccgtcacgcgcctggaacaggcgttggatgcattgttcgaataa
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