Pseudomonas agarici: AWM79_22680
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Entry
AWM79_22680 CDS
T11104
Name
(GenBank) pilus assembly protein
KO
K02674
type IV pilus assembly protein PilY1
Organism
pagb Pseudomonas agarici
Brite
KEGG Orthology (KO) [BR:
pagb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pagb02044
]
AWM79_22680
02035 Bacterial motility proteins [BR:
pagb02035
]
AWM79_22680
Secretion system [BR:
pagb02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
AWM79_22680
Bacterial motility proteins [BR:
pagb02035
]
Pilus system
Pilus assembly proteins
AWM79_22680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T4P_PilY1
EF-hand_5
Dockerin_1
Motif
Other DBs
NCBI-ProteinID:
AMB87929
UniProt:
A0A0X1T7Z6
LinkDB
All DBs
Position
5181685..5184840
Genome browser
AA seq
1051 aa
AA seq
DB search
MSRNKGAGSVYSRLVKLIAGAFFGLYLSAPVYAFTPSDSPLLSAGSVTPNVMLLVDNSGS
MNNLIRATDFHQSTTTPQVYNCASTFSCSTSVNGLIALDMMNENQFINDFYQGGCDTNYD
GFRMGVGASNTPSSTVYCIKFPDPVGGGNTRISNRYVAYLIARMISAGLTKKDYATDSSI
PNDYRINVARNVSSALVTSNRNLRIGLATFNAPTSSDNGRGGNIARIISDLSPVTGSTTQ
AQADTNYSALISSINGLSAIANTPLAETYYEITRYLRGMTPYYNSTPTTYTSPVQYRCQK
NYGVVITDGLPTYDRSFASSDPLGGGNLPNWDRIDNDGNNLSGDAEGNTLYLDDIAKFAY
DIDVRSSGNDAAGKSWDAADFPKQNMFTYSVGFTADNQMLADSARYGHGNYYQATDSAGL
NAALSAALNDITSKAGSGGGGASSSSSLSTNTLFYTSQYDPADWRGTIRAFAFNADGSLS
STTNWSTDTTLSPTGAATPSFQSWNTLTSSPITLTYGNFAPLQQTALGLSLPLGITGNDL
VEWSKGTNKAGLKVRTVYLGDVVNSRLVYASPTDRTASDTVGDTSYTAYLDAKAGGTGMA
ARLVVNANDGFFNVIDPLTGQRLYAYMPSSVINNLHYVADPAYINGSSHKFLNDGQITVA
DAKLNSTWNTVAVGGVGAGGKAFFAIRLYGASTANTIGALWEIKAPAVANPLNVFNDLGY
AYAKPEVARLADGRWAAFIGNGYGSAAGVAALYVVDMRDGSLITKITSDSTGNNGLSSVK
LRVNAQSVVQYAYAGDLKGQMWKFKLTDPAPANWAVAFGGAPLFTALNTTAQPITAQPVI
GNLPGQGKLVYFGTGKLSETADKTTTARQAFYAVLDNDGSSASYTESNLVAQTINAPATG
TSFFTSSQNPVDYTTKKGFYFSLVPNNTPTGERVIYPALLTFGRLIFTTAQVDTSDPCSS
AGSGRLLDVDAVSGAMLTYPILDTNGDGTINASDLAFSGITYSGSVPNIGGLIRQLDGLQ
IIAGPQESGTSAPLLELGGVNNRRIMWRQLQ
NT seq
3156 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagaaataagggcgcaggcagcgtgtattcacggctcgtcaaactgatagccggc
gcctttttcggactgtacctcagcgctccggtttatgccttcacaccttctgactcgccg
ctgttgagcgccggctcggtcacgccgaacgtgatgctgttggtggataattccgggagc
atgaacaacctgattcgcgcgacggacttccatcagtcgacgaccactccccaggtgtac
aactgcgcctcgacgttcagttgcagcactagcgtcaacggcctgatcgcgctcgatatg
atgaatgaaaaccagttcatcaacgatttctaccaaggcggttgcgacacgaactacgac
ggtttcagaatgggtgtaggtgccagcaacacgccgagtagcacagtttactgcatcaag
tttccggacccggtcggtggtggcaatacgcggatttccaaccggtatgtggcttatctc
atcgccaggatgatctcggcggggctgacaaaaaaggattacgccaccgacagcagcatc
cccaatgattatcggatcaacgttgcccgcaacgtgtcatcggcgctggttaccagcaac
cgcaacctgcgcattggcttggcaacgttcaacgccccgaccagtagtgataatggtcgg
ggcggcaatatcgcccgaataatcagtgatttgtctccggtgaccggttcgaccacccag
gcccaggcagacaccaactacagtgcgttgatctcctcgatcaacggtttgtccgcaatc
gccaatacgccgctggctgaaacctattacgagatcacgcgttacttgcgggggatgacg
ccctactacaactcgacaccaactacctacaccagcccggtccagtatcgctgccagaag
aactacggcgtggtcatcaccgacggcttgccgacctacgaccgtagctttgcgagcagc
gatccgttgggtggcggcaatctgccgaactgggacaggatcgataacgacggcaacaat
ctcagtggcgatgccgagggcaacacgctttatctggacgatatcgccaagttcgcctat
gacatcgacgtgcgctcctcgggcaacgatgccgcaggcaagagttgggacgccgcagac
ttcccgaaacaaaatatgtttacctactccgtggggtttaccgccgacaatcagatgctg
gccgatagcgcacggtacgggcatggcaactactatcaggcgaccgacagtgcggggttg
aacgcggcattgtcggcggcgctgaatgacatcacctccaaggccgggtctggcggtggt
ggcgcatcgagctcctcgagcctgagcaccaataccttgttctatacctcgcagtatgac
cctgccgattggcgcggtaccatccgggctttcgcgttcaatgccgatggatcactcagc
tccacgaccaactggagcaccgatacgaccctctcgcccacgggggctgcgactccgagt
tttcagtcgtggaatacgctgaccagttcgcctattaccctgacttatggcaacttcgcg
ccgcttcagcagacggccctgggattgagcctgccgttgggcattaccggcaacgatctg
gtggagtggagcaagggtaccaacaaggccggtttgaaggtccggaccgtctatctgggg
gatgtcgtcaactcacgcctggtttatgcctcgccaaccgaccgcacggcatcggacacc
gttggcgacaccagttacaccgcttacctggatgccaaggctggcggtacggggatggcc
gcacgcctggtggtcaatgccaacgacggttttttcaacgtcatcgatccgctgacgggc
cagcgcctttatgcgtatatgccgtcgagtgtgatcaacaacctgcactatgtcgccgat
ccggcttatatcaatggcagcagccacaaattcctcaacgatggtcagatcaccgtggcc
gatgccaagctcaatagcacctggaataccgttgcggtaggcggtgttggcgcaggtggc
aaggcattcttcgcgatccgcctgtacggtgcctcgaccgccaacaccatcggcgccctg
tgggaaatcaaggccccggctgtcgccaatccgctgaacgttttcaatgacctgggttat
gcctatgccaagccggaagtggctcgcttggccgatggtcgctgggcggcattcatcggc
aacggctatggcagtgccgccggtgtggcggcgttgtatgtggtggatatgcgcgacggc
tcgttgatcacgaaaattacctccgacagtactgggaacaatggcctcagctcggtaaag
ctgcgggtcaatgctcaaagtgtcgtgcaatatgcatacgctggcgatttgaaaggacag
atgtggaagttcaaactgactgatcccgctcctgccaattgggccgtggcatttggcggg
gcgccgctgttcacagccttgaacaccacggcccaaccgattaccgcacaaccggtcatt
ggcaatctgccaggacaaggcaagctggtctatttcggtaccggtaaactcagtgaaaca
gcggacaagaccaccacggcgcgccaggcgttctacgcggtgttggataatgacggcagc
agcgccagttataccgagagcaacctggttgcccagacgatcaatgctcccgcgacaggc
acttcgtttttcacctccagccagaacccggtcgattacacgaccaagaaagggttttac
ttttccttggttcccaacaacacaccgactggggagcgggttatttacccggcgctcctg
acctttggacgattgatcttcaccacggcacaggttgacaccagcgacccttgttccagt
gccgggtcgggacgtttgctggatgtcgatgcggtgagcggggccatgttgacctatccg
attctagacaccaacggcgatgggacaatcaacgccagcgatctggcatttagcggtatc
acttacagtggtagtgtaccgaacatcggtgggcttatcaggcagctcgatgggctccag
atcattgccgggccgcaggagtcagggacatctgctccgttgctagaactgggcggtgtg
aacaaccggcgcatcatgtggcgacaattacagtag
DBGET
integrated database retrieval system