Pantoea agglomerans C410P1: BEE12_00880
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Entry
BEE12_00880 CDS
T04739
Name
(GenBank) ATP-dependent helicase
KO
K19789
DNA repair protein RadD
Organism
pagc
Pantoea agglomerans C410P1
Brite
KEGG Orthology (KO) [BR:
pagc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pagc03400
]
BEE12_00880
DNA repair and recombination proteins [BR:
pagc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
BEE12_00880
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
DEAD
Helicase_C
SWI2_SNF2
AAA_30
DUF7577
zf-tcix
SLFN-g3_helicase
AAA_22
Zn_Ribbon_1
DZR
AAA_16
TniB
SNF2-rel_dom
AAA
Motif
Other DBs
NCBI-ProteinID:
AOE41828
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Position
210295..212049
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AA seq
584 aa
AA seq
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MSFTLRPYQQDAVNATVAHFRRHQQPAVIVLPTGAGKSLVIAELARLARGRVLVLAHVKE
LVAQNHSKYQAYGLEADIFAAGLQRKESQRKVVFGSVQSVARNLDQFDSAFSLVIVDECH
RIGDDKESQYQQIFNHLRQHNPQLRLLGLTATPFRLGKGWIYQFHYHGMVRGDEKSLFRD
CIYELPLRYMIKHQFLVPPERLDMPVVQYDFSRLTAQSSGLFSEADLNRELKQQQRVTPH
IIRQIVEFAEDRLGVMIFASTVEHAHEILRLLPANSALVSAETPARERDALILAFKAQQL
KFLVNVAVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLSPGKTDCLILDYAGNPH
DLFTPEVGAPKGASDNQPVQVFCPACGFANTFWGKATKDGMVIEHFGRRCQGVLEDDEGA
REQCDFRFRFKSCPDCGAENDIAARRCHQCDKILVDPDDMLKAALKLKDALVLRCGGMTL
EQGRDAKGEWLKATYYDEEGTSVSERFRLQTPAQRKAFEQLFMRPHQRAPGVPLGWQNAA
DVLALQPLLRHPDFVVARAKGQFWQIREKMFDYQGRYRRANELR
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttaccttacgcccctatcaacaggatgcggtgaatgccaccgtggcgcatttc
cgtcgtcatcaacagcctgcagtcattgtgctgccgaccggtgccggaaagagcctggtc
attgccgagctggcacggctggcgcgtggccgcgtgctggtgctggcgcacgtcaaagag
ctggtagcgcagaatcacagtaaatatcaggcttacgggctggaggcggatatctttgcc
gccggacttcagcgtaaagagagtcagcgcaaagtggtgtttggcagcgtgcagtcagtg
gcgcgtaacctcgaccagttcgacagcgccttttcactggtgattgtcgatgagtgccac
cgtatcggtgatgataaagagagtcagtatcagcagatcttcaatcatctgcgtcagcat
aatccgcaactgcgtttactgggcctgaccgccacccctttccggctgggtaaaggctgg
atttatcagttccactatcacggcatggtgcgtggcgacgaaaaatcgctgtttcgcgac
tgtatctatgaactgccgctgcgctacatgattaagcatcagtttctggtgccgccggag
cgactggatatgccggtggtgcagtatgacttcagccgcctgacggcacaaagcagcggc
ttgttcagcgaagccgatcttaatcgtgaactgaaacagcagcagcgcgtgacgccccat
attatccgtcagatcgtggagttcgctgaagatcggctgggggtgatgatttttgcctca
acggttgagcatgcgcatgaaattttgcggctgctgcccgctaacagcgcgctggtgtca
gcggaaacgcctgccagagagcgcgatgccctgattctggcctttaaggcgcagcagctg
aaattcctggttaacgtggcggtgctgaccaccgggtttgatgccccccacgttgatctg
attgcgattctacgcccgaccgagtcggtcagcctctatcagcaaatcgtcggacgcggc
ctgcggctctcgcccggcaaaaccgactgtctgattcttgattatgccggtaatccgcac
gatctctttacgcccgaagtcggcgcgcccaaaggggccagcgacaatcagccagtacag
gttttttgtcccgcctgcgggttcgccaacaccttctggggcaaggcgaccaaagatggc
atggttatcgagcattttggccgacgctgtcagggcgtgctggaagatgatgagggcgcg
cgcgaacagtgtgacttccgtttccgctttaaaagctgccccgactgcggcgcagagaat
gatattgccgcccggcgctgtcaccagtgcgacaaaattctggtcgatcctgacgatatg
cttaaagcggcgctgaaacttaaagatgcgctggtgctgcgctgtggcggcatgacgctg
gaacagggccgtgacgccaaaggtgaatggctcaaggcgacctattatgacgaggaaggc
accagcgtcagcgaacggtttcgtctgcagacaccggcccagcgcaaagcgtttgaacag
ctctttatgcgcccgcatcagcgcgcgcccggcgtgccgctgggctggcagaacgccgct
gacgtgctggcgctgcagccgctgctgcgtcatcccgactttgtggtggcgcgggccaaa
ggtcagttctggcagatccgcgaaaaaatgttcgattatcagggtcgctatcgccgtgcc
aatgagctgcgctaa
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