Pantoea agglomerans C410P1: BEE12_02775
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Entry
BEE12_02775 CDS
T04739
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
pagc
Pantoea agglomerans C410P1
Brite
KEGG Orthology (KO) [BR:
pagc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pagc03016
]
BEE12_02775
Enzymes [BR:
pagc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
BEE12_02775
Transfer RNA biogenesis [BR:
pagc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BEE12_02775
Prokaryotic type
BEE12_02775
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AOE38884
UniProt:
A0AAJ5V7A4
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All DBs
Position
complement(645377..646417)
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AA seq
346 aa
AA seq
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MMLNYLHGTPVASGVIKANPEDFVVVEDLGYGADGEGEHLLVRIRKVGANTRFVAEALAK
YLGIHQRDMSYAGMKDRHAVTEQTLCFRLPGNAMPDLRGFELEGVEILQVVRHKRKLRIG
ALAGNAFRLIIRQISDRDAVETRLAQIRDAGVPNYFGEQRFGRGGNNLVMAEKWARNEII
IRDRNKRSLMLSAARSALFNQVTSARLQQQGGLTQVLNGDALQLTGRGSWFVAQPDELAE
SQRRVDQHELRITAPLPGRGEPGPQADALAFEQQALADETLLLGLIEREKVDAARRAMLV
VPRDMQWSWWDDVTLELAFWLPAGSFATSVVRELLTHADSPDQIDE
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgatgctgaattacctgcacggtacacccgtggcctccggcgtgatcaaagccaatccg
gaagatttcgtggtggttgaagatctcggttatggcgcggatggtgaaggtgagcacctg
ctggtgcgcatccgtaaagtgggggccaatacccgctttgtggcggaggcactggcgaag
tatctcggtattcatcagcgcgacatgagttatgccggaatgaaagatcgccatgcggtg
acggaacagacactctgttttcgcctgccgggtaatgcgatgcccgatctgcgcggtttt
gagctggaaggggtcgagattctgcaggtggtgcgccacaaacgtaagctgcgcatcggc
gcactggcggggaatgcgttccggctgatcatccgccagatcagtgatcgtgatgcggtt
gaaacgcgtctggcgcagattcgcgatgcaggcgtgccgaactattttggtgaacagcgt
tttggtcgcggcggcaataacctggtgatggcagaaaagtgggcgcgcaatgagatcatt
attcgtgaccgcaacaagcgcagcctgatgctctctgccgcgcgcagtgcgctgtttaat
caggtgactagtgcgcgtctgcaacagcagggtgggctgactcaggtgctcaacggcgat
gcgttgcagctgaccggacgaggcagctggtttgtcgcgcagcctgatgaactggcagag
tcacagcgccgggttgatcagcatgagctgcgcatcaccgcgccgctgccgggacggggc
gagcctggcccgcaggctgacgcgctggcctttgaacagcaggcactggctgatgagacg
ctgctgctgggactgattgaacgtgagaaggtcgatgctgcacgccgcgccatgctggtg
gtgccgcgcgatatgcagtggagctggtgggatgatgtcaccctggaactggcattctgg
ctgccagcgggcagctttgccaccagcgtggtccgggagctgctgacccacgcggactcg
cccgatcagattgatgagtaa
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