Pantoea agglomerans C410P1: BEE12_07560
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Entry
BEE12_07560 CDS
T04739
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pagc
Pantoea agglomerans C410P1
Pathway
pagc03420
Nucleotide excision repair
pagc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pagc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BEE12_07560
03430 Mismatch repair
BEE12_07560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pagc03400
]
BEE12_07560
Enzymes [BR:
pagc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BEE12_07560
DNA repair and recombination proteins [BR:
pagc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BEE12_07560
MMR (mismatch excision repair)
Other MMR factors
BEE12_07560
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
AAA_30
UvrD_C_2
AAA_11
PhoH
DUF6658
Motif
Other DBs
NCBI-ProteinID:
AOE39723
UniProt:
A0ACC5PQR3
LinkDB
All DBs
Position
1675491..1677653
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AA seq
720 aa
AA seq
DB search
MDVSELLDGLNDNQRAAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV
TFTNKAAAEMRHRIEHLIGTSQGGMWIGTFHGLAHRLLRAHHLDAGLPQDFQILDSEDQL
RLLKRLIKSMNLDDKQWPARQGMWYINGKKDEGLRPKHIESYGNPIEQTWLRIYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPHILNHYRERFTNVLVDEFQDTNNIQYAWIRMLAGDS
GRVIIVGDDDQSIYGWRGAQVENIQRFLQDFPGAETIRLEQNYRSTNNILKAANALIANN
NGRLGKELWTEGSDGEPISIYCAFNELDEARFVVNRIKVWMENGGALNDCAILYRSNAQS
RVLEEALLQSSMPYRIYGGMRFFERQEIKDALSYLRLMANRNDDAAFERVVNTPTRGVGD
RTLDVVRQTARERQMTLWQATRELLQSRALAGRAASALQRFCELVDSLATETAELPLHVQ
TDRVIKDSGLWLMYEQEKGEKGQARIENLEELVTATRQFSYQDEDEDLMPLQAFLSHAAL
EAGEGQADKWQDAVQLMTLHSAKGLEFSQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY
VGVTRAMLKLTLTYAETRRLYGKEVYHRPSRFIGELPEACIEEVRLRASVSRPVNHQRMG
APVTKNDSGFALGQRVHHAKFGEGTIINLEGSGEHSRLQVAFQGQGIKWLVAAYAKLETL
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttctgaactgctcgatggtttgaatgacaatcagcgcgctgccgttgcggca
ccgcgcagtaacctgctggtgctggcaggcgcgggcagtggtaaaacgcgggtgctggtg
catcgcattgcctggctgatgtcggtggagaactgctcgccctattcgattatggcggtg
acctttaccaataaagcggcagcggagatgcgtcaccgtatcgagcatctgatcggcacc
agtcagggcgggatgtggatcggaaccttccacggtctggcgcaccgcttactgcgcgcc
caccatcttgacgccggtctgccacaggattttcagatcctcgacagcgaagatcagcta
cgtctgctcaagcgcctgatcaaatcaatgaaccttgatgacaaacagtggcctgcgcgt
cagggcatgtggtacatcaatggcaaaaaagatgaaggcctgcggccaaagcatatcgaa
agctacggcaatccgattgagcagacctggctgcgcatctatcaggcctatcaggaagcc
tgtgatcgcgcgggtttagtcgactttgccgagctgttgctgcgcgcccatgagttatgg
ctcaacaagccacacattcttaatcactaccgcgaacgctttaccaatgtgctggtggat
gagttccaggataccaacaacattcagtatgcatggattcggatgctggcgggcgacagt
ggccgggtgatcatcgtgggcgatgatgaccagtcgatctacggctggcgcggcgcgcag
gtcgagaatattcagcgctttctgcaggatttccccggcgcggaaacgatccgtctggag
cagaactaccgctcaaccaataacatcctgaaagccgccaacgccctgatcgctaacaac
aatggtcgtctggggaaagagctctggaccgaaggcagtgatggcgaaccgatctcgatc
tactgcgcctttaatgagctggatgaagcgcgcttcgtggtcaaccgcattaaggtctgg
atggagaacggcggcgcgctcaacgactgcgccattctctatcgcagcaacgcccagtcg
cgtgtgctggaagaggcgctgctgcaaagcagcatgccgtaccgtatttatggcggcatg
cgcttcttcgaacgtcaggagatcaaagatgcgctctcctatttgcgtctgatggcgaac
cgcaatgacgacgcggcatttgaacgcgtggtaaataccccgacgcgcggcgtgggcgat
cgcacgctcgacgtggtgcgtcagacggcccgtgaacgtcagatgacgctgtggcaggca
acgcgtgaactgctgcaaagccgtgcgctggccggccgggccgcgtctgcgctgcaacgc
ttctgtgaactggttgattcactggcaaccgaaactgccgagttaccgctgcatgttcag
accgaccgggtcatcaaagactctggcctgtggctgatgtatgagcaggaaaaaggtgag
aagggtcaggcgcgtatcgaaaaccttgaggagctggtgaccgctacgcggcagttcagc
tatcaggatgaagatgaagatctgatgccgttgcaggcctttttatcccacgccgcgctg
gaagcgggcgaaggccaggcagacaaatggcaggatgcagttcagctgatgacgctgcac
tcggcaaaagggctggagttcagccaggtgtttatcgtcggcatggaagagggcatgttc
ccaagccagatgtcactggatgaaggtggccggctggaggaggagcgtcgtctggcttat
gtcggcgtgacccgtgcgatgctgaagctgacgctgacctacgccgaaacccgccgactc
tatggtaaggaagtgtatcaccgcccgtcccgttttatcggcgaactgcccgaagcgtgc
atagaagaagtgcgtctgcgcgccagcgtcagccgtccggtaaaccatcagcgtatgggt
gccccggtgaccaaaaatgacagtggattcgcgctggggcagcgtgttcatcacgcaaaa
tttggcgaaggcaccatcattaatctggaaggtagcggcgagcatagccgtcttcaggtg
gcgtttcaggggcagggaatcaagtggctggtggcggcttacgcgaagctggaaacgctt
tag
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