Pantoea agglomerans C410P1: BEE12_10215
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Entry
BEE12_10215 CDS
T04739
Name
(GenBank) RNA polymerase-binding ATPase
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
pagc
Pantoea agglomerans C410P1
Brite
KEGG Orthology (KO) [BR:
pagc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pagc03021
]
BEE12_10215
Transcription machinery [BR:
pagc03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
BEE12_10215
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
Cas3-like_C_2
AAA_34
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
AOE40187
LinkDB
All DBs
Position
complement(2267164..2270070)
Genome browser
AA seq
968 aa
AA seq
DB search
MVFTLGQRWISDTESELGLGTVVAIDTRMITLLFPATGENRLYARNDSPVTRVIFNPGDT
ITSHEGWQMRVDEVRNENDLMTYIGTRLDTEESEVMLREVMLDSKLVFSKPQDRLFAGQL
DRMDRFALRFRARKYQSEQYRLPISGLRGMRTNLIPHQLHIAHDVGRRHAPRVLLADEVG
LGKTIEAGMIIQQQLLAGRADRVLIVVPETLQHQWLVEMLRRFNLRFALFDDDRYTEAQH
DSDNPFETEQLIICSLDFVRRNKQRLEMLADAEWDLLVVDEAHHLAWSEGEPSREYQVIE
QLAEKTAGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAAFVEEQQHFRPIADAVTALL
ADKAISQEEMNRINDLVGEQDIEPLLQVANSDRDGKLEARQELISMLMDRHGTSRVLFRN
TRNGVKGFPKRELHQIRLPLPAQYQTAIKVSGIMGARKSAEERARDLLYPEQIYQEFEGD
SGTWWNFDPRVEWLMGYLTTNRKEKVLVICAKAATALQLEQVLREREGIRAAVFHEGLSI
IERDRAAAWFASEENGAQVLLCSEIGSEGRNFQFASRLVMFDLPFNPDLLEQRIGRLDRI
GQAHDIQILVPWLEQTAQAVLLRWYHEGLDAFEHTCPTGRTIYDSVHSQLIGYLAAPENS
EGFDAFITDCRKQHDALKLQLEQGRDRLLELNSNGGESAQLLANAISEQDNDTGLVNFAL
NLFDIVGINQEDRSDNLIVLTPSDHMLVPDFPGLPEDGCTITFNRDQALSREDTQFITWE
HPLIRNGLDLILSGDTGSSALSLLKNKALPVGTLLVELIYVVEAQAPKHLQLTRFLPPTP
IRLLMDTKGTNLAGKVEFESFNRQLNAVNRHTASKLVNAVQQDVHAILTQGEESVVSEAR
AVIDAARAEANEKLGAELSRLNALKAVNPNIRDDEVEALESNREQVLESLDQANWRLDAL
RLIVVTHH
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atggtttttacattaggtcagcgctggattagtgatacggaaagtgaactgggactgggc
accgtggtggcgatcgatacccgcatgatcaccctgctgtttccggccacgggggaaaac
cgcctctacgcccgcaacgattcgccggttacccgcgtcatctttaatccgggtgatacc
atcaccagccacgaaggctggcagatgcgcgtcgatgaagtacgcaacgaaaatgacctg
atgacctatatcggtacccgtctggataccgaagagagcgaagtgatgctgcgcgaagtc
atgctcgacagcaagctggtgttcagtaagccgcaggatcgcctgtttgccggccagctc
gaccggatggatcgttttgccctgcgcttccgcgcccgtaaataccagagtgagcaatat
cgcctgccaatcagcggcttacgcggcatgcgcaccaacctgatccctcaccagctgcat
atcgcccacgatgtcggccgccgccatgcgccgcgcgtcctgctggccgatgaagttggc
ctgggtaaaactattgaagccgggatgatcatccagcagcagttgctggctggccgtgcc
gatcgcgtcctgatcgtggtgccagaaaccctgcagcaccagtggctggtcgagatgctg
cgtcgcttcaacctgcgctttgcgctgtttgacgacgaccgttataccgaagcgcagcac
gacagtgataacccgtttgaaacggagcagctgattatctgctcgctcgacttcgtgcgc
cgtaacaagcagcgtcttgagatgctggccgatgccgaatgggatcttctggtggtcgat
gaagcgcaccatctggcctggtcagaaggtgagccaagccgtgaatatcaggttatcgaa
caactggctgagaaaaccgccggcgttctgctgctgactgcaacgcctgagcagctgggc
atggagagtcacttcgcccgtctgcgcctgctcgaccctaatcgtttccatgactttgcc
gcctttgttgaagagcagcagcatttccgtccgattgccgatgcggtcacggcgctgctg
gccgataaagcgatctcccaggaggagatgaaccggatcaacgatctggtcggcgagcag
gatattgagccactgctgcaggtcgccaacagcgaccgtgacggcaagctggaggcgcgt
caggagctgatctccatgctgatggaccgccacggcaccagccgcgtgctgttccgtaac
acccgtaatggggttaaaggattcccgaaacgcgagctgcaccagatccgcctgccgctg
cctgcgcagtatcagacggcgattaaagtctccggcattatgggcgcgcgcaaaagtgca
gaagagcgggcgcgtgacctgctctatccggagcagatttatcaggaatttgaaggcgac
agcggcacctggtggaacttcgatccgcgcgtggaatggctgatgggctatctcaccacc
aaccgtaaagagaaagtgctggtgatctgcgccaaagcggccaccgcgctgcagctggag
caggtactgcgtgaacgcgaaggtatccgtgcagcggtgttccacgagggtctgtcgatc
attgaacgtgaccgggctgccgcctggttcgcctcggaagagaatggtgcgcaggtgctg
ttgtgctccgagatcggttctgaaggccgtaacttccagtttgccagccgtctggtgatg
ttcgacctgccgtttaacccggacctgctggagcagcgtatcggtcgtctggatcgtatc
ggtcaggcgcacgatattcagattctggtgccgtggctggagcagaccgcacaggcggtg
ctgctgcgctggtatcacgaagggctggacgcgtttgaacacacctgcccgaccggccgg
acaatctatgacagcgtccattcgcaactgatcggctatctggccgcgccggaaaacagc
gaaggttttgatgcgtttatcaccgactgccgcaaacagcatgacgcgctgaaactgcag
ctggaacagggtcgcgatcgcctgctggagctgaactccaacggcggcgaatcggctcag
ctactggccaatgccatcagcgagcaggataacgacaccggtctggtgaacttcgcgctc
aacctgttcgatatcgtcggtatcaatcaggaagatcgcagcgataacctgattgtgctg
accccttccgaccacatgctggtgcccgatttccctggcctgccggaagatggctgcacc
attaccttcaaccgcgatcaggcgctgtcgcgcgaagatacccagttcattacctgggaa
catccgctgatccgcaacggtctggatctgattctgtcgggcgataccggcagcagcgca
ctgtcactgctgaagaacaaggcgctgccggtggggacgctgctggtcgagctgatctat
gtggttgaagcgcaggcaccgaagcatctgcaactgactcgcttcctgccgccgacgcca
atccgtctgctgatggataccaaaggcactaacctggcgggcaaggtggagttcgaaagc
tttaaccgtcagctgaatgcggttaaccgtcataccgccagtaaactggtgaatgcggtg
cagcaggatgtgcatgcgattctgacccagggcgaagagagcgtggtcagcgaagcgcgc
gcggtgattgatgctgcgcgtgccgaagcgaacgagaagctgggcgcagaactctcccgt
ctcaacgcgctgaaggcggtaaacccgaacatccgtgacgatgaagtcgaggcgctggaa
agcaaccgtgaacaggtgctggaaagtctcgatcaggccaactggcgtctcgacgcgctg
cgcctgattgtggtgacacaccattaa
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