Pantoea agglomerans C410P1: BEE12_11365
Help
Entry
BEE12_11365 CDS
T04739
Name
(GenBank) ATP-dependent dsDNA exonuclease
KO
K03546
DNA repair protein SbcC/Rad50
Organism
pagc
Pantoea agglomerans C410P1
Brite
KEGG Orthology (KO) [BR:
pagc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pagc03400
]
BEE12_11365
DNA repair and recombination proteins [BR:
pagc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BEE12_11365
Archaeal homologous recombinant proteins
BEE12_11365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
ABC_tran
AAA_21
nSTAND3
cobW
MobB
NTPase_1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AOE40397
LinkDB
All DBs
Position
complement(2519459..2523133)
Genome browser
AA seq
1224 aa
AA seq
DB search
MKILTLRFKNLNALRGEWFIDFRAEPFASNGLFAITGATGAGKTTLLDAICLALYHQTPR
LGAISQSQNALMTRDCAECLAEVEFEIKGEAWRAFWSQNRARGTADGKLQAPRVELARCA
DNIIVADKVGDKLKLIETLSGLDFERFTRSMMLSQGQFAAFLNAKASERAELLEELTGTE
IYGLISAAIYERHKEAKTQLDLLRSQAGAMALLDSDARDALQQQLTELTDAEQRLSAHYQ
QAQQQQQWQQQAQQLQQENAQADIALQQAQAASQAAEADRQRLARSEPAEKLRVKLQQRD
ALRTEQQQVVSRCQQLTAAQQQAQSQQQQHQQHYAATQRARQQALQEQQQQECLLTEQVL
PLDQRISTLQQQLAEQQQENARQQQHADQTQASLAEQKRQVDTWQQAIAEQHQLRQQLAD
LAQWGASLPVWQENFALLAQREATLAGLAQQREQQQRQIATQQAEQQQQAEQALPRQQAE
QQARQALSQAEQVLTSLQEQHPAAALRQALSQLQNSRPARQQLLLLSTQWQPLHQQLGQR
QQRLATLAKAHQQSEAELQALRETWKREKQQLDDVEKICALEQQIVDLSDYRARLAADQP
CPLCGSCTHPAVEAYSTLEVSANQQRRAALQQQTEALREAGTAKSEQLKQSAVQQQTLRD
EIAEMQQQLDRLEQQWQALSSELALTFPLADRDALAAWEQQQSERESQLEQQRQAQEAAE
QARQAAKYYHLQQSQAWQQHLQAEQLAQQSLSSLQQALDALQQRQQQEQQAMAQLQSRLE
QQFSAHNLALPDAAHRDAWLTEQQRRWKRWQESERLLANLQPQLLKGETQLTALQQQAEL
EQQQLTTRQQQQNQSQTQLSEMRRARLALFGDREVTLARQQMQARVQQADEQLAQQLTAL
QQAQAEVSRLQGELSGLENQRQTLNSRLAEAESALQQALESAGFADEASLRAALLDEQTA
LQLRQQLQQLDQQCQQQQARLADLRQRLSAHQQAKPAAMPESAEALAQQLEQLRLALRDN
ASQQGQIQQQLQSDASLRVRQQSLMTQIEQDSVALAQWSLLNDLIGSASGDKFRRFAQGL
TLDHLVALANRQLDRLHGRYLLQRRAQDLLELDVVDTWQADAARDTRTLSGGESFLVSLA
LALALSDLVSHKTRIESLFLDEGFGTLDAQTLDTALDALDALNASGKTIGVISHVEAMKE
RIPVQIKVRKMNGLGYSQLELPQG
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcctcacgctacggttcaaaaacctcaatgccctgcgcggtgaatggttcatc
gacttccgcgccgaaccttttgccagcaacggcctgttcgccattaccggtgccaccggc
gccggtaaaaccaccctgctggatgccatctgcctggcgctctatcaccagacgccgcgc
ctgggcgcgatttcccagagccagaatgcgctgatgactcgcgactgcgccgaatgtctg
gccgaggtggagtttgagatcaaaggagaagcctggcgcgccttctggagccagaaccgc
gcgcgcggcactgccgacggcaagctacaggcaccgcgcgttgagctggcacgctgcgcc
gacaacatcattgttgccgacaaagtcggtgacaagctgaagctgatcgaaaccctctcc
gggctcgatttcgaaaggtttacccgctcgatgatgctgtcacagggccagttcgccgcc
tttctcaacgccaaagccagtgagcgcgcggaactgcttgaggagctgaccggcaccgaa
atttacggtctgatttccgccgccatctacgagcgccacaaagaggcaaaaacccagctg
gatctgctgcgcagccaggcaggagcgatggcgctgctggatagcgacgcacgcgacgcg
ctgcaacagcagctcaccgagctgaccgatgcggaacagcggctcagcgcgcactatcag
caggcgcagcaacagcagcagtggcaacagcaggcgcagcagttacagcaggaaaatgcg
caggctgacatcgcgctgcagcaggcccaggccgcatcccaggcggcagaagccgatcgt
cagcggctggcacgcagcgaaccggctgaaaagctgcgggtaaaactgcagcagcgcgac
gcgttacgtaccgaacagcagcaggtcgtgagccgctgtcagcaactcacggcggcacag
cagcaggcgcagagccaacagcagcagcatcagcagcactacgcggccacccaacgtgcc
cgccagcaggcgctgcaggaacagcagcagcaggagtgcctgctgacagaacaggtgctg
ccgctggatcagcggatcagcacactgcagcagcagcttgcggagcagcagcaggaaaat
gcccggcagcagcagcatgccgaccagacacaggccagcctggcagagcagaagcgccag
gttgatacatggcagcaggcgattgctgaacagcatcagttacgccagcagcttgccgat
ctcgcccaatggggcgcttcgctgccggtgtggcaggagaattttgccctgctggcgcag
cgtgaagcgaccctggccggactggcgcaacagcgcgagcagcagcagagacagatcgcc
acccagcaggcggaacagcagcagcaggcagaacaggcgctgccgcgccagcaggcggag
caacaggcccgccaggcgctgtcgcaggcggagcaagtactaacttcgctacaggaacag
catccggctgccgcactgcgtcaggcattaagccagttgcagaacagccgtccggctcgt
cagcaactgctgctgctttcaacccagtggcagccgctgcatcagcagctgggccagcgc
cagcagcggctggctacgcttgcaaaagcgcatcagcagagtgaagccgaactccaggcg
ctccgcgagacgtggaaacgcgaaaaacagcagctggatgatgtcgaaaaaatctgcgcg
ctggagcagcagattgtcgatctcagtgattaccgcgcccggctcgccgccgatcagccc
tgtccgctgtgcggctcctgcacgcatcccgccgttgaggcctacagcacgctggaagta
agtgctaaccagcagcgccgggctgcactgcaacaacaaaccgaggcattgcgcgaagcg
ggcacggcaaaaagcgaacagctgaaacagtcagccgtgcagcagcagaccctgcgcgat
gaaatcgcggagatgcagcaacagctcgatcggcttgagcagcaatggcaggcgctgagc
agtgagctggcacttaccttcccgctcgccgatcgggatgccttagccgcgtgggagcag
cagcaaagcgaacgtgaaagccagcttgagcagcagcgacaagcgcaggaagccgccgaa
caggcgcgtcaggccgcaaagtattaccatcttcagcagtcgcaggcctggcagcagcat
ttgcaggctgagcagctggcgcagcagtcgctgtccagcctgcagcaggcgctggatgcg
ctgcaacagcgtcagcagcaggaacagcaggccatggcgcaattgcagagtcgtctggag
cagcagttcagtgcgcacaaccttgccctgcccgacgctgcccatcgcgatgcgtggctg
acagaacagcagcggcgctggaagcgctggcaggaaagtgagcggttgctcgctaacctg
caaccgcagctgttaaagggggaaacccagctcactgccctgcaacagcaggcagaactg
gagcagcagcagctcactacccgtcagcagcaacaaaaccagagccagacgcagctcagc
gagatgcgccgtgcccgtctggcgctgtttggcgatcgcgaggtcaccctagcccgtcag
cagatgcaggcccgcgttcagcaggctgatgaacaactggcacagcagctcacggccctg
caacaggcgcaggccgaggtcagtcgcctgcagggtgagctttctgggctggaaaatcag
cgacagactctcaacagcagactggcagaggcggaaagcgcgctgcaacaggcactggag
agtgccggattcgcggatgaagccagcctgcgcgcggcgctgctggatgagcaaaccgct
ctgcaactgcgtcagcagctgcagcaactcgatcagcaatgccagcagcagcaggcgcga
ctggcagatctgcgtcagcggctcagcgcccatcaacaggcgaaacccgctgcgatgccg
gaatccgccgaagcgctggcgcaacagctggagcagttacggctggcactgcgcgacaac
gccagccagcaggggcagattcagcagcagctgcagagcgatgccagccttcgtgtgcgc
cagcaaagcctgatgacacagattgaacaggatagtgtggcgctggcgcagtggagcctg
ctcaacgatctgattggctccgccagcggcgataaattccggcgcttcgcccagggctta
acgctggatcacctggtggccctggctaaccgtcagctcgatcggctgcatggccgctat
ctgctgcagcgacgggcgcaggatctgctggagctggatgtggtcgatacctggcaggcc
gatgcggcgcgcgatacccgcacgctctccggtggtgagagcttcctggtgagtctggcg
ctggcgctggcgttatcggatctggtcagccacaaaacgcgcatcgaatcgctgtttctg
gatgagggatttggcacgctggatgcgcagacgctcgacaccgcgctggatgccctcgat
gcactcaacgccagcggcaaaaccattggggtcatcagccacgtggaagcgatgaaggag
cgcattccggttcagattaaagtgcgcaaaatgaatgggctgggttacagccagctggaa
ctgccgcagggataa
DBGET
integrated database retrieval system
