Pantoea agglomerans C410P1: BEE12_11370
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Entry
BEE12_11370 CDS
T04739
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
pagc
Pantoea agglomerans C410P1
Brite
KEGG Orthology (KO) [BR:
pagc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pagc03400
]
BEE12_11370
DNA repair and recombination proteins [BR:
pagc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BEE12_11370
Archaeal homologous recombinant proteins
BEE12_11370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
AOE40398
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All DBs
Position
complement(2523130..2524329)
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AA seq
399 aa
AA seq
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MRIIHTADWHLGQFFYNKSRAAEHQAFLDWLLIQIEQHQVDALIIAGDLFDTGTPPSYAR
EMFNRFVVALQPSGCQLIVLAGNHDSVATLNESRELLACLNTRVIATPQEKDDVLLLNTR
QGEPGALLCAIPYLRPRDILRSRAGQSGRDKQTSLLEAIAHHYQQRFTAAQALGHALPII
ATGHLTTVGVSQSDSVRDIYIGTLDAFPASAFPAADYIALGHIHRAQRVAGSEHIRYSGS
PIPLSFDELGTEKSVFLLELTTSGLQSVTPLVVPQAQPMQVLKGSLAQIAEQLNAFSTAE
QEKPTWLDIEVTTQEYLSDLQRQVETLTATLPVEVLLLRRSREQRQQSLARLDNETLSEL
KVEEVFARRLALDEELQPAQIAEMTTLFRQTLAAMEETQ
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcattcatactgcggactggcatctggggcagttcttctacaacaaaagtcgg
gcagccgaacatcaggcgtttctcgactggctgttgatccagattgaacagcatcaggtg
gatgcgttgatcatcgcaggcgatctgttcgataccggtacaccgcccagctacgcccgc
gagatgttcaaccgctttgtggtggcgctgcagcccagcggctgtcagctgattgtgctg
gcgggcaaccacgattccgttgctacgctgaatgagtcgcgtgagctgctcgcctgcctc
aatacccgggtgatcgccaccccgcaggagaaggatgatgtgctgctgctcaacacccgc
cagggcgagccgggcgcgctgctgtgtgcgattccctatctgcggccgcgcgatattctg
cgcagccgggcgggtcagtcgggacgcgacaagcagacctcgctgctggaagcgatcgcc
caccactatcagcagcgtttcactgccgcccaggcgctgggccatgcactgccgattatc
gccaccggccatctcaccaccgtcggcgtcagccagagcgattcggtgcgcgacatctat
atcgggacgctggatgccttcccggccagcgcgtttcccgcggctgactatatcgcactg
gggcatattcatcgcgcccagcgcgtcgcgggcagcgaacatatccgctacagcggctcg
ccaattccgctgagctttgatgagctgggcacagaaaaaagcgtcttcctgctggagctc
accaccagcggcctgcaatcagtcacgccgctggtggtgccacaggcgcagccgatgcag
gtgctgaaaggatcgctggcgcagattgcagagcagttaaatgccttcagcacggcagag
caggagaagccgacctggctcgacatcgaagtcaccacccaggagtacctcagcgatctg
cagcgtcaggtagaaaccctgaccgccacgctgccggtcgaagtcctgttgctccgccgc
agccgtgaacagcggcaacagagcctggcgcggctcgacaacgaaaccctgagtgagctg
aaggtggaggaggtctttgcccgccggctggcgctggatgaggagctgcaaccggcgcaa
atcgccgagatgaccaccctgttccgccagacgctggccgccatggaagagacccaatga
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