Pantoea agglomerans C410P1: BEE12_11590
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Entry
BEE12_11590 CDS
T04739
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
pagc
Pantoea agglomerans C410P1
Brite
KEGG Orthology (KO) [BR:
pagc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pagc03032
]
BEE12_11590
03036 Chromosome and associated proteins [BR:
pagc03036
]
BEE12_11590
03400 DNA repair and recombination proteins [BR:
pagc03400
]
BEE12_11590
DNA replication proteins [BR:
pagc03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
BEE12_11590
Chromosome and associated proteins [BR:
pagc03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
BEE12_11590
DNA repair and recombination proteins [BR:
pagc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
BEE12_11590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_bac_2
HU-CCDC81_euk_1
UBA_HYPK
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
AOE40441
UniProt:
A0ABD6XPX9
LinkDB
All DBs
Position
2571041..2571313
Genome browser
AA seq
90 aa
AA seq
DB search
MNKSQLIDKIAADADISKAAAGRVLDAFMGSVSDALKDGDEVALVGFGTFSVRDRAARTG
RNPQTGKEITIPAGKVPGFRAGKALKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
gtgaataagtcacaattgatcgacaaaattgctgccgatgctgatatttctaaagctgca
gcgggacgtgttttagatgcatttatgggctcagtttcagatgcgctgaaagacggtgat
gaagtggctctggtaggtttcggcacattctctgtgcgtgaccgcgctgcacgtaccggc
cgcaacccgcaaaccggtaaagagatcaccatcccggccggtaaagtgccaggcttccgt
gctggtaaagcattgaaagacgctgtcaattaa
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