Pantoea agglomerans C410P1: BEE12_13530
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Entry
BEE12_13530 CDS
T04739
Name
(GenBank) L,D-transpeptidase
KO
K21470
L,D-transpeptidase YcbB
Organism
pagc
Pantoea agglomerans C410P1
Brite
KEGG Orthology (KO) [BR:
pagc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pagc01002
]
BEE12_13530
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pagc01011
]
BEE12_13530
Peptidases and inhibitors [BR:
pagc01002
]
Cysteine peptidases
Family C82
BEE12_13530
Peptidoglycan biosynthesis and degradation proteins [BR:
pagc01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
BEE12_13530
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Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
AOE40782
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Position
2972418..2974229
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AA seq
603 aa
AA seq
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MLLVKKLNHHRVLSLLALALTVVPFTLPQAAVIAALPGTTQAAISVSESQQRIRQAFSSA
DQPFYLAPLATLYASRHMQPLWQDPQAVQKFQQQLAEVALSGVQPQFTRWIERLTNPAIT
GFARDVALSDAMLGYLQFVSNVPTQGETWLYSNVPYRLTQPSVAVVNQWQNAVNAGSGNT
FIASLQPQHPQYQPMHAALKTLLGDKQPWPQLKSSETLRPGQVSDDVPALREILQRSGML
TSQVNAPAPDDDAVPVAASPVTHSDQPVAVSPSAAPVTDLSAPSLQSPGNVQSQTLEGNT
ANVYDETLVAGVKRFQQWQGLDGDGAIGARTRQWLNVSPQMRASLLALNIQRLRLLPDDM
HNGIMVNIANYSLIYYNNGNKILSSRVIVGRPDRKTPLMRSALNNVVLNPPWNVPTTLVR
KDIIPKVKQDPTYLYKHGYTLLSGWSADAEVIDPSMIDWRMVTASSFPYRLIQAPGVANA
LGRYKFNMPSSDAIYLHDTPNHNLFQRDIRALSSGCVRVNKASELAGLLLQDAGWNDARI
TSTLKEGDTRYVPIRHRIPVNLYYLTAWVADDGKPQFRTDIYNYDDTARSGSQALSRAEQ
LLL
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgttgctggtaaaaaaattaaatcatcatcgcgttctatcattgttagcgctggcgcta
acggttgttccatttacgctaccgcaggccgctgtcatcgccgctttgcccgggacaacg
caggcggctatctccgtttccgaaagtcagcaacgcatccggcaggcgttttccagcgcc
gatcagccgttttatctggcaccgctggcgacgctctatgcatcccgccatatgcaaccg
ctctggcaggatccccaggcggtgcaaaaatttcagcagcagctggctgaagtggcgctt
tccggcgttcagccacagttcacgcgctggattgagcgtctgactaacccggcgataacc
ggctttgcccgggatgtcgcgctgtccgatgcgatgctgggctatctgcaatttgtttcg
aatgtgccgacgcagggtgaaacctggctttacagcaatgttccctaccggctgacgcag
ccgtcggtggcggtcgtgaatcagtggcagaatgcggtcaatgcaggttcaggcaacacg
tttattgcgtcactgcagccgcagcacccgcagtatcagccgatgcacgccgcgctgaaa
accctgctaggcgataagcagccctggccgcagctgaagagcagtgaaacactgcgtccg
ggacaggtcagtgacgatgttccggcgctgcgtgaaatcctgcagcgcagcggcatgtta
acgtcgcaggttaatgcgccggcaccggatgacgatgcggttccggtggccgcctcacca
gtgacccacagcgaccagccggttgcggtcagcccttccgccgcgccagtcaccgatctg
tctgcgccttcactgcaatcgccgggtaacgttcagagtcagacgctggaagggaatacc
gccaatgtctatgacgagacgctggtggcgggtgtgaagcgtttccagcagtggcaggga
ctggatggcgacggtgctatcggtgccagaacgcggcagtggcttaacgtctctccgcag
atgcgtgcttcattgctggcgctgaacattcagcgactgcgcctgctgccggacgatatg
cacaacggcattatggtgaacatcgccaactactcgctgatttattacaacaacggcaac
aagatcctctcatcccgggtcatcgtcgggcgtcccgatcgcaaaacgccgttgatgcgc
agcgcgctcaataatgtggtgctgaacccgccgtggaatgtgccaaccacgctggtgcgt
aaagatatcattcctaaagtgaagcaggatccaacctatctctacaagcatggttatacc
ctgttgtcgggctggagcgctgatgctgaagtgatcgatcccagcatgatcgactggcgc
atggtcaccgcttcatcgttcccctatcggttgattcaggcaccgggtgtggcgaatgcg
ctgggccgctataaatttaatatgcccagctcagatgcgatctatctgcacgacacgccg
aaccacaacctgttccagcgtgatatccgcgcgctcagctcaggctgcgtccgggtaaat
aaagcttctgaactggcaggtttattactgcaggatgcgggctggaacgatgcccgcatc
accagcacgttaaaagagggtgacacccgctacgtgcccatccgccatcgtattccggtc
aatctctattatctgacggcgtgggtcgctgatgatggcaaaccgcagttccgcacagat
atttacaattatgatgacaccgcccgttcgggcagtcaggcactgagtcgggctgagcaa
ctgctgctctag
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