Pantoea agglomerans C410P1: BEE12_17335
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Entry
BEE12_17335 CDS
T04739
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
pagc
Pantoea agglomerans C410P1
Brite
KEGG Orthology (KO) [BR:
pagc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pagc03016
]
BEE12_17335
Enzymes [BR:
pagc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
BEE12_17335
Transfer RNA biogenesis [BR:
pagc03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
BEE12_17335
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Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
PilZ
Motif
Other DBs
NCBI-ProteinID:
AOE41462
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All DBs
Position
3776915..3778849
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AA seq
644 aa
AA seq
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MFQDNPLLAQLKEKLHSQTPRAEGVVKGTEKGFGFLEVDGQKSYFIPPPQMKKVMHGDRI
TAVIHSDKDRESAEPETLVEPFLSRFVGRVQKKDDRLSIVPDHPLLKDAIQCRPARDVSH
EFENGDWAVAEMRRHPLKGDRGFYAELTDFIVKADDHLAPWWVTLSRHNLEREAPDVSFG
EMLDENLTREDLTALDFVTIDSASTQDMDDALFAEALDDGALRLTIAIADPTAYVPEGSQ
LDKLAAQRAFTNYLPGFNIPMLPRELSDDVCSLRPNVRRPALACRVTVAADGSLGDDVEF
FAAWIESKAKLAYDDVSDWLENSGAWQPESEAIAEQIRLLHRLCLARSEWRQTHALVFKD
RPDYRFLLGEKGEVLEIVAEPRRIANRIVEESMILANVCAAKVLRDRLGFGIYNVHAGFD
ATNAEQAAAVLANHGITVDAQAITTLEGFRVLRRELDAQPTQFLDSRIRRFQTFAEISTE
PGPHFGLGLEAYATWTSPIRKFGDMINHRLLKAIIRGEQIARPDDALTVTMSERRRLNRM
AERDVGDWLYARYLAPFAATDRRFSAEIIDVSRGGMRVRLLEFGAVAFIPAPFIHAVRDE
LVCSQENGSVQIKGEVVYRVTDVIDVTIAEVRMETRSVVARPAV
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgttccaggataacccgctgctcgcgcagctgaaagagaagctccattcgcaaacgcct
cgtgctgaaggcgtcgtaaaaggcactgaaaaaggcttcggctttctggaagtcgatggg
caaaaaagttacttcattccgccaccacagatgaagaaagtgatgcacggcgatcgtatc
acagccgtgatccacagcgataaagatcgcgaaagcgctgagccggaaaccctggttgag
ccgttcctgagccgctttgttggccgggtacagaagaaagacgatcgcctgtcgattgtg
ccggatcatcccctgctgaaggatgcgatccagtgtcgccctgcgcgcgatgtcagccat
gagtttgaaaatggtgactgggcagtagcggagatgcgtcgccatccgctgaaaggcgat
cgcggcttttatgccgaactcaccgattttattgtcaaagctgatgaccatctggcgccg
tggtgggtgacgctgtcgcgtcataaccttgagcgtgaagcgcccgatgtcagttttggc
gagatgctggatgaaaatctgacgcgtgaagatctgaccgcgctggatttcgttaccatc
gacagcgccagcacccaggatatggatgatgcgctctttgcggaagccctggacgatggc
gccctgcgtctgactatcgctatcgccgaccctaccgcctatgtgccggaaggcagtcag
ctcgataagctggcggcgcagcgtgcgtttaccaactacctgccgggctttaacatcccg
atgctgccgcgcgaactctctgatgatgtctgctcgctgcgtccgaatgtgcgccgtccg
gccctggcctgccgcgtgaccgtggcagccgatggcagcttaggagatgacgttgagttc
tttgccgcctggatcgaatccaaagccaagctggcatatgacgacgtctctgactggctg
gaaaacagcggcgcatggcagccggaaagtgaagcgattgctgaacagattcgcctgctg
catcgcctctgcctggcgcgcagcgaatggcgtcagacccacgcgctggtgtttaaagat
cgcccggattaccgcttcctgctgggtgaaaaaggtgaagtgctggagatcgtggctgaa
ccgcgccgcatcgctaaccgcattgtcgaagagtctatgattctggccaacgtctgcgcg
gcgaaagtgctgcgtgaccgtctcggttttggtatctataacgtccatgccggtttcgat
gccaccaatgctgaacaggccgccgccgtgctggccaaccatggtattaccgtggatgcg
caggcaattaccacgctggaaggcttccgggtgctgcgtcgtgagcttgatgcccagccg
acccagttcctcgacagccggatccgtcgcttccagaccttcgctgagatcagcaccgag
cctggcccgcactttggcctgggacttgaggcttacgccacctggacctcaccgattcgt
aagttcggcgacatgatcaaccatcgtctgctgaaagcgattattcgcggtgagcagatc
gctcgtccggatgatgcgctgacggtgacgatgagtgagcgccgccgcctgaaccgtatg
gcggaacgtgatgttggcgactggctctacgcccgttatctggcgccgtttgcagcaacc
gaccgtcgcttcagcgccgagattatcgatgtgtcccgtggtggcatgcgtgttcgcctg
ctggagtttggcgcggtcgcctttatcccggctccgttcattcacgcggtgcgtgatgag
ctggtttgcagccaggaaaatggcagcgtacagataaaaggcgaagtggtttaccgtgtg
accgatgtgattgatgtcaccatcgccgaagtccgcatggaaacccgcagcgtcgtggca
cgtcctgccgtctga
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