Pantoea agglomerans C410P1: BEE12_17810
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Entry
BEE12_17810 CDS
T04739
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pagc
Pantoea agglomerans C410P1
Pathway
pagc00061
Fatty acid biosynthesis
pagc00071
Fatty acid degradation
pagc01100
Metabolic pathways
pagc01212
Fatty acid metabolism
pagc02024
Quorum sensing
pagc04146
Peroxisome
Module
pagc_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pagc00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
BEE12_17810
00071 Fatty acid degradation
BEE12_17810
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
BEE12_17810
09145 Cellular community - prokaryotes
02024 Quorum sensing
BEE12_17810
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pagc01004
]
BEE12_17810
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pagc04147
]
BEE12_17810
Enzymes [BR:
pagc01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
BEE12_17810
Lipid biosynthesis proteins [BR:
pagc01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
BEE12_17810
Exosome [BR:
pagc04147
]
Exosomal proteins
Exosomal proteins of breast milk
BEE12_17810
Exosomal proteins of breast cancer cells
BEE12_17810
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
DUF4235
AMP-binding_C_3
MDN1_4th
Motif
Other DBs
NCBI-ProteinID:
AOE41548
LinkDB
All DBs
Position
complement(3876666..3878375)
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AA seq
569 aa
AA seq
DB search
MEIQHNYRGGSLNKVWLKRYPADVPAEISADRYTSLVDLFEQAAKRYADQPAFLNMGQKM
SYRQLEEKSRAFAAYLQQQLGLKAGDRVALMMPNLLQYPVALFGVLRAGMVVVNVNPLYT
PRELQHQLNDSGASAIVIVSNFAHTLEKVVAKTAVRHVILTRMGDQLAPIKATLVNFVVK
YVKKLVPKYHLPGAISFRHVLEVGETLNYQRPTVSNDDLAFLQYTGGTTGVAKGAMLTHR
NMQANLEQTRATYGKVLRDGKECVVTALPLYHIFALTVNGLLFLELGGQNLLITNPRDIP
GFVKELGKFPFTAITGVNTLFNALLNDEQFNKLDFSTLRLSAGGGMAVQKVVAERWEKLT
GHYLLEGYGLTECSPLVSVNPYDISCHTGSIGLPVPSTDVLILDDDGNEVAPGEPGELCI
SGPQVMLGYWQHPEATAEVLKNGWLHSGDIVTVDQEGFIRIVDRKKDMILVSGFNVYPNE
IEDVLMQHPKVREAAAIGVPSDLSGEAVKVCIVKKDASLTKEEVLDHCRRQLTGYKVPKI
IEFRDELPKTNVGKILRRELRDEAKPGAS
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atggaaatacaacataattatcggggtggatccttgaataaggtttggctgaaacgctac
ccggcagatgtgcctgccgaaataagtgcagatcgttacacctcgctggtggatctgttt
gagcaggccgcaaaacgctacgccgatcaacccgcgttcctgaacatgggtcagaagatg
agttatcgtcagctggaagagaagagccgcgcttttgccgcctatcttcagcaacagctg
ggcctgaaagcgggtgaccgggtggcgctgatgatgcctaatttactgcagtatccggtg
gccctgtttggtgtgctgcgtgcgggtatggtggtggtcaatgtcaatccgctctatacg
ccgcgcgagctgcagcatcagctcaatgacagtggggccagtgcgattgtcattgtctcg
aattttgcgcacacgctggaaaaagtggtggcgaaaaccgctgtgcggcacgttatcctg
acccggatgggcgatcagctggcgccgataaaagcgacgctggttaactttgtcgttaag
tatgtgaagaagctggtgcccaaataccatctgccgggggctatctcatttcgccacgta
ctggaagtcggcgaaacgctcaattatcaacgcccgacggtctccaatgacgatctcgcc
ttcctgcaatataccggtggcaccactggcgtagccaaaggggcgatgctgacccatcgc
aacatgcaggcgaatcttgaacagacccgcgcgacctacggcaaagtgctgcgcgacggt
aaagagtgtgtcgttaccgcgctgccgctttatcacattttcgccttaacggtgaatggc
ctgctgttcctggagctgggcggtcagaatctgttgatcaccaatccgcgcgatatcccc
ggctttgttaaagagctggggaaatttccgtttaccgccattaccggcgtgaacacgctg
tttaacgcgctactcaacgatgagcagttcaataaactcgatttttcaacgctgcgtctt
tccgccggtggcggaatggcggtgcagaaagtggtggccgagcgctgggaaaaactgacc
ggacactatctgctggaaggctatggcctgacagagtgttctccgctggtgtcagtcaat
ccctatgacatcagctgccataccggcagtatcggtctgccggtgccctcgacagatgtg
cttattctggatgacgacggcaatgaagtcgctccgggtgaaccgggcgaactttgcatc
agcggcccgcaggtgatgctgggctactggcagcatccggaagcgacagcggaagtgctg
aaaaatggctggctccacagcggtgatattgttaccgttgaccaggaaggctttattcgc
atcgttgaccgtaaaaaagatatgattctggtatcaggttttaatgtctatccgaatgaa
atcgaagacgtgctgatgcagcatcctaaagtgcgtgaagccgcggctatcggtgttccc
agcgatctttctggcgaagcggtaaaagtctgcatcgtgaaaaaagatgcgtcgctgacc
aaagaagaggtgctcgatcactgtcgccgtcagctgaccggttacaaggtgccgaaaatc
attgagtttcgtgatgagttgcctaaaaccaatgtcggcaagatcctgcggcgtgagctg
cgcgacgaggcgaaacccggcgcgagctga
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