Pantoea agglomerans C410P1: BEE12_21440 Help Entry BEE12_21440       CDS       T04739                                  Name (GenBank) ATP-dependent helicase   KO K03724   ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] Organism pagc  Pantoea agglomerans C410P1 Brite KEGG Orthology (KO) [BR:pagc00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:pagc03400]     BEE12_21440 Enzymes [BR:pagc01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.4  DNA 3'-5' helicase      BEE12_21440     5.6.2.6  RNA 3'-5' helicase      BEE12_21440 DNA repair and recombination proteins [BR:pagc03400]  Prokaryotic type   Other factors with a suspected DNA repair function    DNA helicases     BEE12_21440 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DEAD_assoc WHD_Lhr DEAD WHD_2nd_Lhr WHD_4th_Lhr WHD_3rd_Lhr Helicase_C ResIII AlkZ-like PhoH Motif Other DBs NCBI-ProteinID:  AOE42479 LinkDB All DBs Position unnamed1:456164..460702 Genome browser AA seq 1512 aa AA seqDB search MSMMSKSQSDAVLARFSSATRRWFSATFAAPTPVQQAAWQAIASGEHALVIAPTGSGKTL AAFLTAIDTLFQFRTNQPSPSRETTTRILYISPVKALAADVQRNLNLPLAGVYAERQALN EPEITLNIGMRSGDTPGAERARLVRRPPDILITTPESLFLMLTSKARTTLQGVTTVIIDE VHAVAGTKRGSQLALSLERLDALLPQPAQRIGLSATVRSVERVAAFLGGCQPVQVVNPAA DRTLHLTIEVPVEDMTDIASADDLTGEATSASGSIWPHIEARILQQVMAHRATLVFVNSR GLAEKLTARLNARYLAQQTAAGDRDAERDDSDDLIARSHHGSVSKEQRGEIEAALKLGRL LCVVATSSLELGIDMGPVDLVIQVGAPLSVASALQRVGRAGHQVGGVSTGILFPRTRRDL LDSAVTLQSMRAGQLDALAPPRNPLDILAQQTLAAVAMDPLQVDDWYAQVCRADPFRTLS RRLFDATLDMLAGKFPSDAFAQLRPQLVWDRQSGLLTPRPGAQHLAVTSGGTIPDRGMFS VILPEGEEQAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITHDQVLVVPAPGRPAR LPFWRGEGVGRSADSGASLGLFLRHLDAALPADAQEQLRALGLDARAVTNLLALLAEQRA VTGVVPDDRTLLIERCRDEIGDWRVILHSPWGKRVNAPWALAIAARIQQRLGIDASVAAS DDGIVARFPASEGVLPGADLFMFDADQLTREVTESVGQSALFAARFRECASRALLLPRRN PGKRSPLWQQRLRAGQLLEVARQYDDFPILIETARECLQDVYDLPALHQLMEQIAQGKVK LVEVTTEQPSPFAAPLLFGYVAEFIYASDAPQAERRASLLALDSNLLGELLGQTSKRDLL APDVVEQVEQELQRIDSRYQAQHTEGIIDLLRDLGPLPVAGIAARFSGNAQQIAEAMTQF AAAQRMIPITLAGEERWAIIEDAARLRDALAVVLPDDLPETFLEPQADPLRDLINRYART HTLFTARQLATHFGLGVAVVNEVLLSLHQQGNLLNMGSPEGASETEWVSTEIFKRLRLRS LQSAREATRPVPPAAWISLLLERHGVLNTQREEHQGVSGLLRVIEQLAGVPLPASLWEPQ ILRARIADYQPAMLDELLASGEVTWCGHKALGQNDGLISLHLTEYAAETLPVIDTTQPLT LIQQATLDALSRGGSWFVHEIMAQMNEAETQTTDIYAALWQLVWQGYVTADSWIAVRGLL TTPGATRSRPARTLRTRFGQRFTPGALSARRPAVNTLAGRWSRVNRQEIAPARLALSLVE NLLDRYGVISRGSAISEQIPGGFPALQPVLRSMEDAGRLLRGRFVAGAGGAQFADHNTIE RLRELAEKPLTATEAVALAASDPANPFGALLSWPLHASGIRPTRRQGGRVVIAGGALVLY LTPGGKELLTFIDDPALQQVAVAALGLALKREKPASFTLEKVDGEPVSQSPLLNALRHAG FSRVPQGLSWYS NT seq 4539 nt NT seq  +upstreamnt  +downstreamnt atgagtatgatgtcgaaatcccaatctgatgcggttttagcccggttttcatccgccaca cgacgctggttttctgccaccttcgctgcacccacgccggtgcagcaggcggcatggcag gcgatagccagcggagaacatgcgctggtgatcgccccgaccggttcagggaagacgctg gcggccttcctcaccgccatcgacacgctgtttcagttccgaaccaaccagccctcaccc tcgcgtgaaacgaccacccgcatactctatatttcaccggttaaagcgctggccgcggac gtacagcgcaaccttaatctgccgctggcgggcgtttacgctgagcggcaggcgctgaat gagccagagatcactctgaatatcggaatgcgttccggcgatacgcccggtgcagagcgc gccaggctggtgcgccgcccgcccgatatcctgatcaccacacccgagtcgctgtttctg atgctgacctcaaaagcgcgaacgacgctgcagggcgtgaccacggtcatcatcgatgag gtgcatgcggtggcgggaacaaagcggggttcccagctggcgctgagcctggagcggctc gatgcgctgctgccacagcccgcccagcgtatcgggctttccgccacggtacgatcggtt gagcgggtcgccgccttccttggcggctgtcagcccgttcaggtcgttaatccggccgcc gaccggacgctgcacctgaccatcgaggtgccggtcgaagatatgaccgacattgccagc gccgatgatctgaccggtgaagccacctctgccagcggttcgatctggccgcacattgaa gcgcgcattctgcagcaggtcatggcccatcgcgccacgctggtgtttgtgaattcgcgt ggcctggcggaaaagctgacggcgcggctcaatgcgcgttatctggcgcagcagacagcc gctggcgatcgggatgcagaacgcgacgacagtgacgatcttattgcccgctcgcatcac ggttccgtctcgaaggagcagcgaggcgagattgaagccgcacttaagctgggcagactg ctctgcgtggtggcgacttccagtctggaacttggcattgatatggggccggtggatctg gtgatccaggtgggtgcaccgctttcagtcgccagcgcattgcagcgggtgggacgcgcc ggacatcaggtcggcggcgtatcaaccggcatcctgtttccgcgcacccgacgcgatctg ctggattcggccgtcacattgcagtcgatgcgtgcgggccagctcgatgcgctggctccg ccgcgtaacccgctcgatattctggcacagcaaaccctggcggccgtcgcaatggatccc ttacaggtcgatgattggtacgcgcaggtctgtcgggccgatccgtttcgcactctgtcg cgtcggctgtttgatgccacgctcgatatgctggcgggtaagtttccctcagacgccttt gctcagctacggccgcagctggtgtgggatcgtcagagcggactgctgacgccgcgaccc ggcgctcagcatctggccgtgaccagcggcggcaccattcccgatcgcggcatgttcagc gtcatcctgccggaaggcgaagagcaggctggctcacgtcgtgtcggcgagctggatgaa gagatggtctatgagtcgcgggtcaatgacattattaccctgggcgcaacgtcgtggcgg attcagcagattacccacgaccaggtactggtggtgcctgcgccaggccgtccggctcgt ctgcctttctggcgcggagaaggtgtgggccgctcggccgattcgggtgccagcctcggg ctgtttctgcgtcatctggatgcggctttaccggcggatgcgcaggagcagttgcgcgcg ctggggctggatgcccgcgcagtcacgaatctgctggctttgctggctgaacaacgcgcc gtcaccggcgtagtgccggacgatcgcacgttgctgattgaacgctgccgtgacgaaatc ggcgactggcgggtgatcctgcattcgccctggggaaagcgggtcaatgcgccctgggcg ctggcgattgccgccagaatccagcaacgcctgggcattgatgcttctgttgcggccagc gatgacggcattgtggcccgctttcccgccagcgagggagtgttacccggcgctgacctg tttatgttcgacgctgaccagttgacccgggaagttactgagagtgtcggtcagtcggcg ctgtttgccgcccgcttccgtgaatgtgcctcacgcgctctgctgctgccgaggcgtaat ccgggcaaacgatcgccgctctggcagcagcggctgcgcgccggtcagttgctggaagtc gcacgacagtatgacgatttccccatccttatcgaaactgcacgcgaatgtctgcaggat gtctacgatctgcctgccctgcaccagctgatggaacagatagcacaggggaaagtaaag ctggtcgaggtgacgaccgaacagccctccccttttgccgcgccgctgctgtttggctat gttgcagaatttatttacgccagcgacgccccccaggcagaacggcgcgcctcactgctg gcgctcgacagtaatctgctgggtgagctactcggccagaccagcaagcgtgatttgctg gcacctgacgtcgttgagcaggttgaacaggaactgcagcgcatcgattcccgctatcag gcgcaacacaccgaaggcattatcgatctgctgcgcgatcttggcccgctcccggttgcc ggtattgcggcacgttttagtggcaacgcccagcagatcgcggaagccatgacgcagttc gcggccgcgcagcgaatgatcccgatcacccttgccggtgaagagcgctgggcgatcatt gaagatgcagcccgcctgcgcgatgcactggccgttgtactgcctgacgatctgcccgaa acatttctggagccgcaggccgatccgctacgcgatctcattaaccgctacgcccgaacc cataccctgttcaccgcccgacagctggccacgcattttggtctgggtgtggccgtcgtg aatgaggtactgctttccctgcatcagcagggcaacctgctcaatatgggttcgccagag ggcgcatcggaaacggagtgggtttccacagagatcttcaaacggttacgcttacgttca ctgcagtcagcacgtgaagcaacccggcctgttccacctgccgcctggattagtctgctg ctggagcgtcacggtgtgcttaacacgcagcgtgaagagcatcagggtgtcagcgggctg ttacgggtgattgagcaacttgcgggcgtgccgctaccggcctcgctgtgggagccacaa atcctgcgcgccaggatagccgactatcagcccgcgatgcttgatgaactgttagccagt ggcgaggttacctggtgcggacacaaagccctgggtcagaatgatgggttgatctcactg cacctcacggaatatgccgctgaaacactgccggtgattgacactacgcagcctctgacg ctgattcagcaggcgactctcgacgcattgagccggggtggctcgtggtttgttcatgag ataatggcacagatgaatgaggcagagacgcaaaccaccgatatttatgctgccctgtgg caactggtgtggcagggctatgtcactgccgatagctggattgcggtgcgtgggctgctt accacgccaggcgcgacccgctcacgtccggcgcgtaccctgcgcactcgttttggtcag cgcttcaccccgggcgcactttctgcacgccgaccggcggtcaacacgctggctggtcga tggtcgcgggttaaccgacaggagatagcccctgcccggctggccctgtcgctggtggaa aatcttctcgaccgttatggggtgatcagccggggtagcgcgatatcggaacagatcccc ggcggattcccggcgttacagccggtattacgcagcatggaagatgccggacgactgctg cgtggccggtttgtcgctggtgcgggcggcgcgcagtttgccgaccataacaccattgag cggctgcgggagctggcagaaaagccgctgaccgcgacagaggcggtggcgctggccgca tcggacccggcgaatccgtttggcgcgttgctgagctggccgctccacgccagcggcatc cgcccgacccgccgtcaggggggacgagtggtgattgcaggcggcgcgctggtactctac ctgacgccgggaggcaaagagttgctgacattcatcgacgatcccgcgctgcagcaggtc gcggtggcggcgctgggcctggcgctgaaacgtgaaaagcccgcgagtttcacgctggag aaggtagatggtgaaccggtgtcgcagtcaccgctgcttaacgcgttgcgacatgccgga ttttcacgggtgccgcaggggctcagctggtatagctga

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