Pantoea vagans FDAARGOS_160: AL522_00415
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Entry
AL522_00415 CDS
T04302
Name
(GenBank) conjugative relaxase
Organism
pagg
Pantoea vagans FDAARGOS_160
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TrwC
TraI_C
AAA_30
TraI_2B
TraI_hel_assoc_N
AAA_19
ssDNA_TraI_N
UvrD_C_2
Motif
Other DBs
NCBI-ProteinID:
AMG56203
LinkDB
All DBs
Position
unnamed1:69238..75081
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AA seq
1947 aa
AA seq
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MMTVAPVASAADAAGYYSSKDNYYFLDDMPTQWMGDGARELGLEGPVDLDTFTGILHGNL
PNGVTLGKEMQGAHVHRPGHDFTFSAPKSVSMLILAGGDKRLLEAHHDAVKETLAIMEQT
ISARDTKEGITRIVTSGKMVAALFTHDTSRNLDPQVHTHAVVANVTELDGKWKALATDTI
HGAGFIETAYRNQITYGKIYRNVLKGKAEAIGYETVPTGGRHDLWEIKGFTETVLEEFSS
RHREIHARAGEDASLKSRDVAALDTRQRKQDISRYGEDETAPVHTRPDPSALNVTPEPTM
DRAVTAAKNPPEIRGKASSSAAIREQDEPITIPVPVPERSETAAEKPPVIVEEPSIVPPV
RELDAPIEKPETADGRTRLQDRWQRQMNDVGFDIGSVISEAKAREAMLPAQEETVPALTQ
AMDAVRIAISVLSDNRTRFTYGDLLLTAHEAGETQQKLPDLRRAIDQAIGEDLLTPLDGE
KGVFTSHIHLLDELSVQSLTADILKENKVANLRIFSKAPPAHLGKAARAPVSILNAPASV
QRLRETTEELVTMSREQGRDVKVLTSSAERALSFGKSPLIKNDLLSRSRVLDSTFSLGIQ
STLIIEGAEKLGLKEMLVLTGEAREKNAQLIFLDSAGRQSNANALSVLASAGVERLTLST
PAPEMATRVMSIQDKRERYQVLADRYAELSGGDAPVTAVVTGAREQQQLTGVIRDALQNA
GKLGRNAVNVEARTPVFATAKERRLPATYRSGMVLEDRTGKEETRHYVIDRVHEDTRMLS
LTDSDGVLTRVKMADLNGDWRLFTRTTLSVAQGEQLFALAADKEAGLKARERLTVTSVEN
GMLTIQKEGQKRPLRLSADNPLYVTHGYVSAPGSRDHEAGTVLASLGTRDLSANMMNALA
QSGSQAEIYTGEALSRAEEKLGRLQGNRTPLELVRQLSGREEAGEAMDALKSGVQTDAQK
AVSRAVANMRDVAFPFAQLTEKATEFLGSTRGVIGEITRLEDAGELIKVPYDGEARYVAR
ATWEMEKAIIREVEAGKNTLTPLMESALAVLPSSLTVGQRDASALILQSADRFTAVQGYA
GVGKTTQFNAVKTAIDTLPETVRPIVIGLGPTHRAVKEMRSIGIEGQTMKSFLLDWQQRT
AAGEKVSYGNTLFLIDEASMLGNQDTAEAMRAIAAGNGRAVMVGDVAQLESPESGAPFRL
LQERSPIDVAVMKEIKRQLSDDLRGAVYSVIENKAAAALEKIDRVSPAVVSRQAGSQTPV
RSVVEIPPPPKDENGNELPSPDGKRAPRVHDAIVADYMSRTPSARAETLIVVSLNDDRRA
INAGIHQAMTEAKELGGKAVQVPVLERVSGGRHDFNKFDAWRVGHVVLSGERYLNVIGLD
RGTNNVLLRDEDGRMRYYSPAELNATEIEVFRKETLELRTGDSIRMNKTQRQAGHAAHEQ
YRVAALHDNGDVVLQGTSGKKVISPGDTLADRHIDYAWAVTGHGAQGASSRFVIALESAT
GRRGMISGMRSFYISLSRAKEHVQVYSDNVKRWKEALIREEKGFKTAHDALSPEIERKQA
RAIWSMGQPLAKTAIGRAFLNSNALRGGPVTARIIPPTRKYPEPHLALPAYDGNGKAAGL
TLIPLRHEKGTLNPGQPRQLATDSAQAALLQKSRNGETVIVSDLAQGLTAARDRPEAGVV
ILTGRQQPSAQLLRVAGGHTEQAMRPDATLLSLVKAELQDMLKMLPLNEPAQDERDILRT
ALEAIKDSLVLPEVHREEKGERALDSAEIRKTAQLLSEVPVIKLPETSREGMDKNTLPAE
LAERIAEAMQHKLSVLPAETAPDYSSLVRQASEALAQAGDMPPDAAVRAVLNALSGSRLP
SGITSQGEMQAGGSLPASVVRHVQDELAAIQVTGKHMQETISDREVAGVARELDRQVQLT
LPPEVRGREPERELPSPEITRHIQKER
NT seq
5844 nt
NT seq
+upstream
nt +downstream
nt
atgatgaccgttgctccggtggcctctgccgccgacgctgccggctactatagcagcaag
gataactattactttctggacgacatgccgacgcagtggatgggagatggggcgcgcgag
ctcggccttgaggggccggttgaccttgatacgttcaccggcattctgcacggcaacctg
cctaacggcgtgacgctgggtaaagaaatgcaaggcgcgcacgtgcaccgtccgggacac
gactttaccttttcggcacctaaaagcgtatcaatgcttatccttgcaggcggcgacaaa
cgcctgctggaggcacaccacgacgcggtgaaagagacgctggctattatggagcagacg
ataagtgcccgtgacacgaaggagggtattacgcgcatcgtgaccagcggtaaaatggtc
gcagcactgtttacgcacgatacctcgcgcaacctcgacccgcaggttcatacccacgct
gtggtggctaacgtcacggagctggacggcaagtggaaggcgctggccaccgatactatt
cacggtgccggtttcatcgagacggcgtaccgaaaccagataacatacggcaaaatctac
cgcaacgtgcttaaaggaaaggctgaggctatcggttatgaaaccgttccgaccggcggc
cgtcatgatttgtgggagataaagggctttaccgaaacagtgctggaggagttctcctct
cgccaccgggaaattcacgcacgcgccggtgaggatgcatcgctgaaaagccgcgacgtg
gccgcactcgatacccgccagcgtaagcaggatattagccggtatggcgaagacgaaacc
gcaccggtacacacccggccagacccctccgccttaaatgtaacgcctgagcccacaatg
gatcgcgcggtaactgccgcgaaaaatccccctgaaattagggggaaagcatcgtcaagt
gctgcaatcagggaacaggacgagccgatcacgatacctgtacctgtcccggagcgttct
gagactgctgcagagaaaccgcccgtaatagttgaagaaccatcaatagtaccgccagtt
cgggagctggacgcgccgatcgagaagccagaaaccgctgatggccggacccgcctgcag
gatcgctggcagcggcagatgaatgacgtcggatttgatatcggcagcgttatcagtgaa
gcgaaggcccgtgaggcaatgctgcccgcccaggaggaaaccgtacccgcactaactcaa
gctatggacgccgtacgcatcgcaatttcggtactgagcgacaacagaacccgctttacc
tatggagatctgctgctgaccgctcacgaggcgggtgagacgcagcaaaagctgccagac
cttcgccgcgcaatcgaccaggcaattggtgaggacttgctgacgccgctcgacggtgaa
aagggtgttttcacttcgcatattcaccttctcgatgaactctctgtgcagtcactgacg
gcggacattctcaaagagaataaagtggcgaacctgcgtatcttttcaaaagcaccgccg
gcacatctcggaaaagcggcgcgggcgccagtgtcgatcctgaatgcccctgcttccgtg
cagcggctacgtgaaactactgaggagctggtgacaatgtcacgggaacaggggcgggac
gtgaaggtactaaccagctccgcggagcgcgctctgagctttgggaaatccccgttgatt
aaaaatgacctgctgtcgcgcagccgcgtgctggacagcacgttcagcctcggcatacag
agcactcttatcattgagggtgcggaaaaactcggtctgaaagaaatgctggttctgacc
ggcgaggcgcgtgaaaagaacgcgcagctgatatttctggatagcgccggtcggcagtca
aacgcaaacgccctttccgtgctggcctctgctggagtggagcgccttacgctgagcacc
ccagcgcctgaaatggctacccgggtaatgagtatccaggacaagcgcgagcgctatcag
gtcctggccgatcgttatgccgaactcagcggcggagacgcgccggtgacggccgtcgtg
accggggcccgggaacagcagcagctcacaggcgtcatccgcgacgcgcttcagaacgcc
ggaaagctcgggcggaatgcagtaaacgttgaggcgcgcacgccggtgtttgctacagca
aaagagcgccggcttccggctacctatcggtcgggaatggtgcttgaggaccgcactgga
aaagaagagacgcgtcactacgtcattgatcgtgtgcatgaagatacgcgcatgctgtcc
ctgaccgacagcgacggcgtgctgacgcgggtgaaaatggcagatctgaatggggactgg
cggttgtttacacgtaccacacttagcgtggcacagggtgagcaactttttgcgcttgcg
gccgacaaagaggctggcctgaaggccagggaaaggctcacagtgacttcagtggaaaac
ggcatgctgactattcagaaggagggccagaagcgtccgcttcgtcttagtgcagataat
ccgctttacgtcactcacggttacgttagtgcgcccgggagcagggaccacgaggcaggt
acggttcttgcttcgcttggcacccgcgacctgtccgccaacatgatgaacgcactggcg
cagtccggaagccaggctgaaatctacactggcgaagcgctgagccgtgcggaagagaaa
ctcgggcgcctgcagggcaaccgtactccgcttgaactggtccgccagctgagcggccgc
gaagaggccggtgaagccatggacgcactcaaatcaggggttcagaccgacgcgcagaag
gctgtttcacgcgcagtggccaacatgcgggatgttgctttcccgtttgcacagctgacg
gaaaaagcgaccgagtttcttggcagcacccggggtgtcatcggggaaatcacccgactt
gaggacgccggggaactcattaaggtgccgtatgatggcgaggctcgctatgttgcccgc
gctacatgggagatggagaaagcaatcattcgagaggtggaggctgggaaaaacaccctt
acaccactgatggaaagtgccttagccgtgctgccctccagcctgacagtgggacagcgt
gatgcgtcagcacttattctgcagagcgccgatcgcttcacggcggtacagggctacgca
ggtgtgggtaaaactacgcagtttaatgccgttaaaactgccattgatacactgcccgaa
accgtgcggccgatcgttatcggcctggggccgacgcatcgtgctgtcaaagaaatgcgc
agcatcggtattgagggccagactatgaagtcgtttctgcttgactggcagcagcgcact
gccgccggtgaaaaggtcagctacggtaatacgctgtttctcattgacgaggcctccatg
ctgggtaaccaggacacggctgaagcaatgcgtgccatcgcggcgggcaatggcagggcg
gtaatggtgggggacgtcgcacagcttgaatcaccggagagcggagctcctttccgcctg
ctgcaggagcgcagcccgattgacgtagcggtgatgaaggaaatcaaacgccagctaagc
gatgatctgcgcggagcggtgtacagcgtgattgagaataaagccgccgcggcactggag
aaaattgatcgcgtttcacctgcggtggtgtcacgtcaggcgggcagccagacgccggta
cgttcggtagttgaaatcccacctccgccaaaggatgaaaacggcaacgagctgcctagc
cccgatggtaaaagggcaccccgtgtccatgacgcaatcgtagccgattacatgagccgc
acgccgtcagctcgtgcagagacgcttattgtggtctcactgaatgacgaccgtcgggcc
ataaacgcaggtattcaccaggccatgacggaggcaaaggagctgggcggaaaggcggtc
caggtgccggtgcttgagcgagtcagcggcggacgtcatgactttaacaagtttgatgcc
tggagggtcggtcacgtagtgctgagtggtgagcgttacctgaatgtcataggcctggac
cgcggcacgaataatgtgctgctgcgcgacgaggatggccggatgcgttactactcgcca
gccgagctgaacgccactgaaatcgaggtgttccggaaggaaacactcgaactgcgtacc
ggtgacagcatccgcatgaacaaaacccagcggcaggcaggccatgcggcgcatgaacag
taccgcgtggcggcgctgcatgacaatggtgatgttgtgctgcagggcacatcaggtaag
aaagtgatctctcccggcgatactttggcggaccggcacattgactacgcgtgggcagtg
accggccatggcgctcagggggcgagtagtcgcttcgttatcgcgctggagagcgcaaca
ggccggcggggtatgatcagcgggatgcgttcgttttatatcagcctgtcgagggcaaaa
gagcacgtgcaggtttactctgataacgtgaaacgctggaaagaggcgttgatacgggag
gaaaagggctttaaaaccgcccacgatgcgctgtcgccagaaattgagcgtaagcaagcc
cgggctatctggtcgatgggccagcccctggcgaaaaccgctatcggacgtgcatttctg
aacagtaatgcactccgcggcgggccggttacggcgcgcatcatcccgccgacacgtaag
tatccagaaccgcatctggcattaccggcttatgacggtaacggtaaagcagccggcctg
acgttaattccgctgcgccacgaaaaaggaacgcttaaccccggccagcctcgccagctg
gcaactgatagtgcacaggccgctctgctgcagaaaagccgaaatggtgagactgtcatc
gtaagcgatctggcgcagggtcttacagctgcgcgtgacagaccggaagctggcgtagtg
atactcaccgggaggcagcagccgtctgcacagcttctcagagttgctggcgggcatacg
gaacaggcgatgaggccggatgctacgctgctgagtctggtcaaagcagagttgcaggac
atgctaaagatgctgcctttaaatgaaccagcacaggatgagcgcgacattcttcggacc
gccctggaagctattaaagattcgttagtattgccagaagtgcatagagaggaaaaaggc
gaaagggctttggattctgccgaaatcaggaaaactgctcaactcctgtcagaagtgcca
gttataaaactacctgaaacttcgcgtgaagggatggacaaaaatactctgccggcagag
cttgcagagcggatagctgaagctatgcagcataaattgtccgttcttcccgcagaaact
gcgccagattacagttcacttgtccgtcaggcatccgaggcacttgctcaggctggcgat
atgccacctgatgcggctgtccgggccgttcttaacgcgctgtcgggcagcagattgcct
tcaggtattacatcgcaaggtgagatgcaggctggcggctcgcttccagcttcggtggta
cgccatgttcaggatgaactggcggcgatacaggtaaccggtaagcatatgcaggaaaca
atctctgacagggaggttgcaggcgttgcccgggagctggacaggcaagtacagcttaca
ctgccaccggaagttcgtggccgggaacctgagcgagaattaccgtcccccgaaattaca
cgccatatccagaaagaacgttga
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