Pantoea vagans FDAARGOS_160: AL522_02880
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Entry
AL522_02880 CDS
T04302
Name
(GenBank) type III secretion protein HrpW
Organism
pagg
Pantoea vagans FDAARGOS_160
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
AMG56654
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Position
unnamed3:53310..54764
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AA seq
484 aa
AA seq
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MSGLTLRITIPNSLGHFQPGENNGPSTGNNANSALGQQPGDQQTIEHMAQLLATLLKPLI
SSQSGDSSSDANGISALSGPGNSGGAYGVSGNSPLSDLGHASGLTGQNGSVSGASQDDSQ
SMLNDMSSNGLDQSLSSDGQGGGNISDNPLLKALLKLIAQMMDGLNGQYGQPDGSDGSSS
SGGGTSLADGSGGGVAGGSSPFGGTSLADGSGGGASLGGGSLTGGSGGDESLPTSPVFSG
HEASSLPTGTPAVGSTTHTPVSDHADPLGSAGTGAAQDVGFPTASANPNVVHDTIVVKAG
QIFDGKGQTFTAGNELGDGGQSESQKPLFKLEDGASLKNVVIGNNGADGIHLYGDAKIDN
LHVTNVGEDAITVKPNKEGKKSNVEISNSTFQNASDKILQLNADTDLTVNNVKAKDFGTF
VRTNGGRQGDWDLNLSHISAQNGKFSFVKSDSEGLKVNTSDVSLDNVENHYKVPASAKLT
AVAS
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggtctgacacttagaattactatcccgaactcgctagggcattttcagcccgga
gagaataacgggccttctaccggtaataacgcaaactccgctctgggccagcagcccggt
gatcagcaaaccattgaacacatggctcagctgttggcgacactgttaaaaccactgatc
tcctcccagagcggagattcctccagtgatgctaatgggattagtgcgttatccggccca
ggcaactccggcggggcgtatggcgtatctggcaacagtccgctctccgacttaggtcat
gcaagcggcctgacaggtcagaacggcagtgtcagcggcgcatcgcaggatgacagccag
tcaatgcttaatgatatgagcagcaacgggctggatcagagccttagctctgacggtcag
ggcggcggtaatatcagcgacaatccgttgctaaaagcgttactgaagcttatagcgcag
atgatggacgggctgaacggtcagtatggtcagccagacggcagtgacggttcatcttct
tctggcggcggcacctctctggcggatggctcgggtggtggggtagctggcggcagctct
ccttttggtggcacctcacttgccgatggttcagggggcggtgcttctcttggcgggggc
tcgcttaccggcggttccggcggcgacgagtccctccccacctcaccggttttcagcggt
catgaggcgagttcgctgcctaccggcactccggctgtggggtcaaccacgcacacgccg
gttagcgatcacgccgatccgctgggcagcgcaggcaccggcgcggcgcaggatgtgggt
ttccccaccgccagcgccaatcctaacgtggtgcacgacaccattgtggttaaagccggc
cagatctttgatggtaaagggcagaccttcactgccgggaacgaactgggcgatggcggt
cagtccgaaagccagaaaccgctgtttaaactggaagacggcgccagcctgaaaaatgtg
gtgattggtaataacggtgcagatggcatccacctctacggtgatgccaaaatcgataat
ctgcatgtcaccaatgtgggtgaggatgccattaccgtgaagcccaataaagagggaaaa
aaatctaatgttgaaatcagcaacagcaccttccagaatgcatcggataaaattcttcaa
ctgaatgccgatactgacctgaccgttaacaatgtgaaagcgaaagactttggcactttc
gtccgcactaacggcggccggcagggggattgggatctgaatctcagccacatcagtgcg
cagaacggcaagttctcgttcgtgaaaagcgacagtgaagggctgaaagtcaataccagt
gatgtctcgctggacaacgttgaaaaccactacaaggttccggcatccgctaaactgaca
gcggtagcgtcatga
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