Pantoea vagans FDAARGOS_160: AL522_04090
Help
Entry
AL522_04090 CDS
T04302
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
pagg
Pantoea vagans FDAARGOS_160
Pathway
pagg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pagg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AL522_04090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pagg03400
]
AL522_04090
Enzymes [BR:
pagg01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
AL522_04090
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
AL522_04090
DNA repair and recombination proteins [BR:
pagg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AL522_04090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
C1_2
Motif
Other DBs
NCBI-ProteinID:
AMG56875
LinkDB
All DBs
Position
complement(120370..121179)
Genome browser
AA seq
269 aa
AA seq
DB search
MPELPEVETSRRGIEPHLVGETILHAVVRNSRLRWPVSQEILALSDQPVLSVQRRAKYLL
LELPHGWIIIHLGMSGSLRVLSGELPAAKHDHVDLVMSNGKVLRYTDPRRFGAWLWSRDL
TGSSVLAHLGPEPLSDQFDGTDLFDKSRGKRTLIKQWLMDNKVVVGVGNIYASESLFTAG
ILPDRAAGSLSQAEAVLLVNTIKAVLLRSIEQGGTTLRDFLQTDGKPGYFAQQLQVYGRA
GEPCRACGTPIISGRHGQRSTYWCPNCQH
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgccagagttgccagaggttgagaccagccgccgcggtatcgagccgcatttggtcggt
gaaaccattcttcacgccgtggtgcgtaattcacgtctgcgatggcctgtttcgcaggag
atcctggcgctaagcgatcagccggtgctcagcgtgcagcgtcgggcgaaatatctgctg
ctggaactgccgcatggctggattattatccatctgggcatgtcgggcagcctgcgcgtg
ctatccggggagctgccagcagcgaagcatgaccatgttgatttggtgatgagcaacggc
aaagtactgcgttacaccgacccgcgccgctttggtgcctggctctggagccgcgatctg
acgggcagcagcgtgctggcgcatcttgggcctgagccgcttagcgaccagtttgacggc
actgacctgtttgataagtcacgtggtaaacggacgctcatcaagcagtggctgatggat
aacaaagtggtagtgggcgtgggcaacatttacgccagtgagtcactgtttaccgccggg
atccttcctgatcgtgccgcaggaagtctgtcgcaggctgaagcggtgctgctggtcaac
accattaaagcggtgctgttacgttcaattgagcagggcggtactacgctgcgtgacttc
ttacagaccgacggcaagcctggctattttgcccagcagttgcaggtttatggccgggcc
ggtgaaccctgccgggcatgcggtacgccgattatcagcggcaggcacgggcagcgcagc
acctactggtgccccaactgccagcattaa
DBGET
integrated database retrieval system
