Pantoea vagans FDAARGOS_160: AL522_04200
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Entry
AL522_04200 CDS
T04302
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
pagg
Pantoea vagans FDAARGOS_160
Pathway
pagg03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pagg00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AL522_04200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pagg03021
]
AL522_04200
03400 DNA repair and recombination proteins [BR:
pagg03400
]
AL522_04200
Enzymes [BR:
pagg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AL522_04200
Transcription machinery [BR:
pagg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AL522_04200
DNA repair and recombination proteins [BR:
pagg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AL522_04200
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Motif
Other DBs
NCBI-ProteinID:
AMG56896
UniProt:
A0AAN1TU79
LinkDB
All DBs
Position
139482..139757
Genome browser
AA seq
91 aa
AA seq
DB search
MARVTVQDAVEKVGNRFDLVLVAARRARQMQVGGKDPLVPEENDKPTVIALREIEEGLVT
NQILDVRDRQEQQEQEAAELQAVTAIAEGRR
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atggcacgcgtaaccgttcaggacgcagtagaaaaagttggtaatcgttttgacctggtg
ttggtcgctgcacgtcgtgcacgtcagatgcaggttggcggcaaagatccgctggttccg
gaagagaacgacaagcctaccgttatcgctctgcgcgaaatcgaagaaggtctggtcacc
aatcagattttagatgtgcgtgaccgtcaggaacagcaagagcaggaagccgctgagtta
caggccgttaccgctatcgctgaaggtcgtcgttaa
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