Pantoea vagans FDAARGOS_160: AL522_04285
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Entry
AL522_04285 CDS
T04302
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pagg
Pantoea vagans FDAARGOS_160
Pathway
pagg03030
DNA replication
pagg03410
Base excision repair
pagg03420
Nucleotide excision repair
pagg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pagg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AL522_04285
03410 Base excision repair
AL522_04285
03420 Nucleotide excision repair
AL522_04285
03440 Homologous recombination
AL522_04285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pagg03032
]
AL522_04285
03400 DNA repair and recombination proteins [BR:
pagg03400
]
AL522_04285
Enzymes [BR:
pagg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AL522_04285
DNA replication proteins [BR:
pagg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
AL522_04285
DNA repair and recombination proteins [BR:
pagg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
AL522_04285
NER (nucleotide excision repair)
GGR (global genome repair) factors
AL522_04285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH
HHH_2
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AMG56913
LinkDB
All DBs
Position
complement(161130..163916)
Genome browser
AA seq
928 aa
AA seq
DB search
MAQIAENPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLKSLLAQYNPSHVAV
VFDAKGKTFRDELFEHYKSHRPPMPDELRAQIEPLHEMVRAMGLPLLAVSGVEADDVIGT
LALEAEKKGLSVLISTGDKDMAQLVTPAITLINTMSNTILGPEEVEQKYGVPPALIIDFL
AMMGDSSDNIPGVPGVGEKTAQALLQGLGSMQTIYDNLDKVADLGFRGAKTMATKLEQNR
DVAFLSYQLATIKTDVELVLPCEELMVTEPDVEALQALFSRYEFKRWLSDLQDGKWLQGK
KSNTQAQKALSDEPVPVAETSSVLPTENYVTILDQDLFDSWLEKLKNSEVFAFDLETDAL
DTLSANIVGISFAIAPGEAAYLPVAHDYLDAPDQLDRATVLAQLKPLLEDDSAWKVGQNL
KYDRGVLKNYDIELAGIKFDTMLESYILNSVVGKHDMDSLAARWLNHKTVTFQEIAGKGK
NQLTFNQIALEQASHYAAEDADVTLQLHLKMWPELEKEAGPRKVFEQIEMPLLTVISRIE
RNGVLIDQAILAQHSKELTARLAELELKAHELAGESFNLSSTKQLQVILFEKQGIKPTKK
TPGGAPSTSEEVLAELALDYPLPKVILEHRGLSKLKSTYTDKLPLMINPLSGRVHTSYHQ
AVTATGRLSSADPNLQNIPVRNDEGRRIRQAFVAAKGYRIVAADYSQIELRIMAHLSQDK
GLLDAFAQGEDIHRATASEVFGVPLDKVSAEQRRSAKAINFGLIYGMSAFGLSRQLNIGA
GEAKKYMDLYFERYPGVLRYMENTRQLAASKGYVETIEGRRLWLPDIKSSNAIRRKAAER
AAINAPMQGTAADIIKRAMIAVDAWLEQQNDNSVRMIMQVHDELVFEVKAEAVEAASQKI
RALMEGSVQLDVPLLVEAGVGDNWDEAH
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaaatagcagaaaatcccctcattctggtcgatggctcatcctatctttatcgc
gcgtatcacgcgtttccgccgctgactaatagtgcaggtgaacccactggcgccatgtac
ggcgtgctcaacatgctgaaaagcctgctggcgcaatataatccgagtcacgttgctgtg
gtgttcgatgccaaaggcaaaaccttcagggatgagctgttcgagcattataaatctcat
cgtccgccgatgcctgacgaactgcgagcacaaatcgagccgctgcatgagatggtgcgg
gcgatgggtctgccgttactggctgtgagcggtgttgaggccgatgatgttatcggtacg
ctggcgctagaagcggagaaaaaagggctttcagtgctgatcagcaccggcgataaagat
atggcgcagctggtcacgccagccatcacgctgattaacaccatgagcaacaccatcctg
gggccggaagaggtcgagcagaaatatggtgtgccaccggccttaatcatcgattttctg
gccatgatgggcgacagctcagataacattcctggcgttcccggcgtgggtgagaaaacg
gcacaggctctgctgcagggtttgggcagcatgcagaccatctatgacaatctggacaag
gtagccgatctcgggttccgtggtgccaaaaccatggcgaccaagcttgagcagaatcgt
gatgtagcctttctctcttaccagctggcgaccattaagaccgacgttgagctggtgctg
ccctgtgaagagcttatggtcacggaacccgatgtcgaagcattgcaggccctgttcagc
cggtacgaattcaaacgctggctgagcgacctgcaggatgggaaatggctgcagggcaag
aagagcaatactcaggcacagaaagcgctctctgatgagccggttcctgtggctgaaacc
agtagcgtattaccgaccgagaattatgtcaccattctggatcaggatcttttcgacagc
tggctggagaagctgaaaaacagcgaggtctttgcctttgatctggagaccgacgcgctg
gataccctgagcgctaacatcgtgggcatcagcttcgcgattgcgcccggcgaagccgcc
tacctgccggttgcccacgactatctcgatgcgcctgaccaactggatcgcgcgaccgtt
ctggctcagctcaagcccctgctggaagatgacagcgcctggaaagtgggccagaacctg
aaatacgatcgtggcgtactgaaaaactacgatattgaactggccggtatcaaattcgac
accatgcttgagtcctatattctcaacagcgtggtgggtaaacatgacatggatagcctg
gctgctcgctggcttaaccacaaaacggtcaccttccaggagatcgctggtaaaggcaaa
aatcagctgacgttcaatcaaatcgcattggagcaggcatcccattatgctgccgaagat
gccgatgtgaccctgcagttgcatctgaagatgtggccagagctggagaaagaagccggc
ccgagaaaagtcttcgagcagattgagatgccgttactaacggtaatttccaggattgag
cgtaatggcgtgttaatcgatcaggctattctggcgcaacactcgaaagagctgactgca
cgattggctgagcttgaattaaaagcgcatgagctggcgggggaatcctttaatctctca
tccaccaagcagcttcaggtgatcctgtttgaaaaacagggcatcaaaccgactaagaaa
accccaggcggtgcgccgtcaaccagcgaagaggtgttagctgagctggcactcgactat
ccgctgcctaaagtgattctggaacatcgcggcttatccaaacttaagtcgacctatacg
gataaattacccctgatgatcaacccgctgagcgggcgggtgcatacctcttatcatcag
gccgttaccgcaaccggtcgcttatcctctgccgatccgaatctgcaaaacatcccggtg
cgtaatgacgaaggacgccgaatccgtcaggcctttgtcgcggccaagggctatcgcatt
gtggcggcagactattcacaaatcgaactgcgtatcatggcgcatctttctcaggataaa
ggattactggacgcttttgcccagggcgaagatattcaccgtgccacggcatccgaagta
tttggtgtaccactggataaggtcagcgccgagcagcgccgtagtgcgaaagcgatcaac
tttggtctgatctatggcatgagtgcatttggtctgtcgcgccagctgaacattggcgca
ggcgaagcgaaaaagtatatggatctctattttgaacgctacccgggcgtgctgcgctat
atggagaacacccgccagctggcggcaagtaaaggctatgtcgaaacgattgaaggtcgt
cggctgtggttgccggatattaaatccagcaacgccattcgccggaaagccgctgaacga
gccgcaatcaatgcgccgatgcagggaacggcagcggatattatcaagcgggcgatgatt
gctgttgatgcgtggctggaacagcaaaacgacaatagtgtcagaatgatcatgcaggtt
cacgatgaattggtgttcgaagtgaaagcggaggctgttgaagcagccagccagaaaatc
cgtgcgctgatggagggtagcgtgcagctcgacgtgcctttactggttgaagccggtgtg
ggtgacaactgggatgaagcccactga
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integrated database retrieval system
