Pantoea vagans FDAARGOS_160: AL522_05340
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Entry
AL522_05340 CDS
T04302
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
pagg
Pantoea vagans FDAARGOS_160
Pathway
pagg00071
Fatty acid degradation
pagg00280
Valine, leucine and isoleucine degradation
pagg00310
Lysine degradation
pagg00362
Benzoate degradation
pagg00380
Tryptophan metabolism
pagg00410
beta-Alanine metabolism
pagg00640
Propanoate metabolism
pagg00650
Butanoate metabolism
pagg00907
Pinene, camphor and geraniol degradation
pagg00930
Caprolactam degradation
pagg01100
Metabolic pathways
pagg01110
Biosynthesis of secondary metabolites
pagg01120
Microbial metabolism in diverse environments
pagg01200
Carbon metabolism
pagg01212
Fatty acid metabolism
Module
pagg_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
pagg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
AL522_05340
00650 Butanoate metabolism
AL522_05340
09103 Lipid metabolism
00071 Fatty acid degradation
AL522_05340
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
AL522_05340
00310 Lysine degradation
AL522_05340
00380 Tryptophan metabolism
AL522_05340
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
AL522_05340
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
AL522_05340
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
AL522_05340
00930 Caprolactam degradation
AL522_05340
Enzymes [BR:
pagg01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
AL522_05340
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
AL522_05340
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
AL522_05340
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
AL522_05340
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Motif
Other DBs
NCBI-ProteinID:
AMG57105
LinkDB
All DBs
Position
complement(403742..405925)
Genome browser
AA seq
727 aa
AA seq
DB search
MLYQGANLTLHWLDDGIAELVFDATGSVNKLDTQTVASLGEAIAVLEQQPELRGLLLSSA
KPAFIVGADITEFLSLFDAPTEKLSQWLSYANSIFNRLEDLPVPTLSAIDGYALGGGCEC
VLATDLRIATADARIGLPETKLGIMPGFGGSVRLPRLLGADSALEIIAAGKDVDGNAALK
LGLVDAVVAREKLREAGIIMLKAAAADDSWRARRAPKLAPLKLSPIEAAMSFTIAKAMVL
QTAGKHYPAPLMAVKTIEAAASLGRDDALKLETAAFVPLAQSDEARALVGIFLNDQYVKS
LAKKRASESGSPAQAAVLGAGIMGGGISYQSAWKGVPVRMKDINPQALTLGMNEASKLLN
KLLERGKIDGSKLASVIATIQPTLDYAGFDQAEVVVEAVVENPLIKAKVLAETEQHLRQD
AILASNTSTIPISQLAHALQRPENFCGMHFFNPVPRMPLVEVVRGEKTSEATLSKVVAWA
SKMGKTPIVVNDCPGFFVNRVLFPYFAAFSLLLRDGADFRQIDKVLEKQFGWPMGPSWLL
DVVGIDTAHHAQSVMADGFPDRMKHDYRDAIDLLFDAGRFGQKNGKGFWRWEEDKKGKLK
KVPDAEVDTLLQQVCQPARVFSDEEILNRMMLPMLNEVVRCLEEKIIASPAEADMALVYG
LGFPPFRGGAFRYLDTLGNSNAVDQARRYSALGGLYALPALLVQKAHQHESWYPAAKPID
EAALKSA
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgctctaccaaggcgctaaccttactcttcactggctggacgatggcatcgccgagctg
gtttttgacgctacaggctcggtcaataagctcgatacgcaaacggtcgccagtctgggc
gaggcgattgcggtgctggaacagcagccagaactgcgcggcctgctgctgagctccgct
aaacctgcttttattgtgggcgcggatatcaccgagttcctttccctgtttgatgcaccc
accgaaaagctaagccagtggctgagttatgccaacagcatcttcaaccgcctggaagat
ttaccggtgccaaccctgtccgccattgacggctatgcgctgggcggcggatgtgaatgc
gtgctggcaaccgatctgcgtatcgccactgcggacgcccgtattggcctgccggaaaca
aaactcggcatcatgcccggctttggcggcagcgtgcgactaccgcgcctgctgggtgcc
gacagtgcgctggaaattattgcggcgggcaaagatgtggatggcaatgccgccctgaaa
ctcggtctggtcgatgcggtcgtggcgcgtgagaaactgcgcgaggcggggatcatcatg
cttaaggccgctgccgcagatgacagctggcgcgcacgccgtgcaccgaaactggcaccg
ctgaaactcagcccgattgaagcggcaatgagcttcacgattgcgaaagcgatggtgctg
cagaccgcaggtaaacactatcccgctccgctaatggccgtaaaaacgattgaagcggca
gccagcctgggtcgtgatgatgcgctgaaacttgaaacggcggcgtttgtgccgcttgcg
cagtctgatgaagcccgcgcactggtcggcatcttcctcaacgaccagtacgtgaaaagc
ctggcgaaaaaacgcgccagcgaaagcggctcaccggctcaggcagcggtactgggcgcg
ggcatcatgggtggcggtatcagctaccagtcggcatggaaaggcgtgccggtcagaatg
aaagacattaatccgcaggcgttaacgctggggatgaatgaagccagcaagctgctcaat
aaactgctggagcgcggcaaaatcgacggcagtaaactcgccagtgtgatcgccactatt
cagcccaccctggattacgccggttttgaccaggccgaggtggtggtggaagccgtggtc
gagaacccgctgatcaaggccaaagtgctggcggaaaccgaacagcatctgcgtcaggat
gcgattctggcctccaatacctcaaccattcctatcagccagctggcacatgcgctgcag
cgcccggaaaatttctgtggcatgcacttcttcaatccggtgccgcgtatgccgctggtt
gaagtggttcgcggcgagaaaaccagtgaagcgacactgagtaaagtcgtggcatgggcc
agcaaaatgggcaaaacgcctatcgtggtgaatgactgccccggcttctttgtgaaccgg
gtactgttcccctacttcgctgcttttagcctgctgctgcgcgacggcgctgatttccgt
cagattgataaagtgctggaaaaacagttcggctggccgatggggccttcatggctgctg
gatgtagtaggcattgataccgcacaccacgcgcaaagcgttatggcggatggtttcccg
gatcgcatgaagcatgactatcgcgatgcgatcgacctgctgtttgatgccggtcgtttt
ggtcagaaaaatggcaaaggcttctggcgctgggaagaggataaaaagggcaagctgaag
aaagtgccggatgcggaggtggatacgctgttgcaacaggtctgtcagcccgctcgggtc
ttcagtgatgaagagatcctgaaccgtatgatgctgccgatgctgaatgaggtagtgcgc
tgcctggaagagaagattatcgcctcgcccgctgaagcggatatggcactggtttatggt
ctcggcttcccgccgttccgtggcggcgctttccgctatctcgataccctgggcaacagc
aatgcggtcgatcaggcccggcgctacagtgcgcttggtggcctgtatgccctgcctgcg
ctgctggtgcagaaagcccatcagcatgaaagctggtatcccgccgccaaaccgattgat
gaagccgcgctgaaaagcgcctga
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