Pantoea vagans FDAARGOS_160: AL522_06535
Help
Entry
AL522_06535 CDS
T04302
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pagg
Pantoea vagans FDAARGOS_160
Brite
KEGG Orthology (KO) [BR:
pagg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pagg03016
]
AL522_06535
Enzymes [BR:
pagg01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
AL522_06535
Transfer RNA biogenesis [BR:
pagg03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AL522_06535
Prokaryotic type
AL522_06535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
AMG57314
UniProt:
A0AAN1NNS9
LinkDB
All DBs
Position
667868..668812
Genome browser
AA seq
314 aa
AA seq
DB search
MSRPRRRGRDVHGVLLLDKPQGVSSNDVLQKVKRIFNANRAGHTGALDPLATGMLPICLG
EATKFSQYLLDSDKRYRVIARLGERTDTSDADGNIVQTRPVSFSQADLDSALESFRGDTL
QVPSMFSALKHQGRPLYEYARQGIVIEREPRPITVYELQFIRWQDNELELEIHCSKGTYI
RTIIDDLGEKLGCGAHVIMLRRVQVARYPYERMVTLEQLNTLLAEATEAGIPLETQLDPL
LLPMDSPASDFPEVNIPPAVADFFRQGQPVQASNAPAHGLVRVSEGEARKFIGMAEIADD
GRLAPRRLVVEYQD
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgtccgcgtcgtcgcggtcgcgacgtccatggcgtgttgttgctggataagcca
caaggcgtttcgtcgaatgatgtcctgcagaaagtgaagcgtatcttcaacgccaatcgc
gcaggccataccggcgcgcttgatccactggccaccggcatgttgccaatctgcctgggt
gaagcgaccaagttttcgcagtatctgctcgattccgacaaacgctaccgtgtgattgcc
cgactgggcgaacgcactgacacgtcagacgccgatggcaacatcgtgcagacgcgtccc
gtcagcttcagccaggccgatctggatagcgcccttgagagcttccgcggcgacacgctg
caggtgccatcaatgttttcagcgctgaagcatcagggtcgtccgctgtatgaatatgcg
cgtcagggcattgtgattgagcgtgaaccgcgcccgatcacggtctatgagctgcagttt
attcgctggcaggataatgagctggagctggaaattcactgctccaaaggtacctatatc
cgtaccatcatcgatgatctgggcgaaaagctgggatgcggtgcgcatgtcatcatgctg
cgtcgtgtacaggttgcccgttatccgtatgaaaggatggtaacgctggaacagctcaat
accctgctggcggaagccacagaagcaggcatcccactggaaacgcagctcgatccgctg
ttgttgccgatggacagtcccgcctctgatttccctgaagtgaatatcccgcccgccgtg
gcagattttttccgccagggacagccggtgcaggccagcaatgcgcctgcgcacgggctg
gtcagggtatcggaaggcgaagcacgtaagtttatcggtatggcagaaattgccgatgat
ggccgtcttgcgccacgtcgtttagtggttgagtatcaggattaa
DBGET
integrated database retrieval system
