Pantoea vagans FDAARGOS_160: AL522_07395
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Entry
AL522_07395 CDS
T04302
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
pagg
Pantoea vagans FDAARGOS_160
Pathway
pagg00220
Arginine biosynthesis
pagg00240
Pyrimidine metabolism
pagg00250
Alanine, aspartate and glutamate metabolism
pagg01100
Metabolic pathways
pagg01110
Biosynthesis of secondary metabolites
pagg01240
Biosynthesis of cofactors
Module
pagg_M00051
De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP
Brite
KEGG Orthology (KO) [BR:
pagg00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
AL522_07395 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
AL522_07395 (carB)
00220 Arginine biosynthesis
AL522_07395 (carB)
Enzymes [BR:
pagg01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
AL522_07395 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
ATP-grasp
Dala_Dala_lig_C
ATP-grasp_3
ATP-grasp_4
ATPgrasp_Ter
CoA_binding_2
ATP-grasp_5
BamE
Motif
Other DBs
NCBI-ProteinID:
AMG57467
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Position
867704..870931
Genome browser
AA seq
1075 aa
AA seq
DB search
MPKRTDLKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEM
ADATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERHGVLEEFGVTMIGATA
DAIDKAEDRRRFDVAMKSIGLDTARSGIAHTMEEALAVAEDVGFPCIIRPSFTMGGTGGG
IAYNREEFEEICERGLDLSPTNELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAM
GIHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVETGGSNVQFSVNPKDGRLIVIEM
NPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGLTPASFEPSIDYVVTKIP
RFNFEKFAGANDRLTTQMKSVGEVMAIGRTFQESMQKALRGLEVGANGFDPKVHLDDPEA
LTRIRRELKDAGSDRIWYIADAFRAGMSVDGVFNLTNIDRWFLVQIEELVRLEDQVASEG
VNSLDATFLRILKRKGFADARLATLAGVAESEIRKLRQQFNLHPVYKRVDTCAAEFATDT
AYMYSTYEEECEANPSPDREKIMILGGGPNRIGQGIEFDYCCVHAALALREDGYQTIMVN
CNPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEQPKGVIVQYGGQTPLKLARALEAAGVP
VIGTSPDSIDRAEDRERFQQAVDRLKLKQPANATVATLEQAVEKAAGLGYPLVVRPSYVL
GGRAMEIVYDEIDLRRYFQTAVSVSNDAPVLLDRFLDDAVEVDVDAICDGERVLIGGIME
HIEQAGVHSGDSACSLPAYTLNQEIQNVMRQQVEKLAFELNVRGLMNVQFAVKDNEVYLI
EVNPRAARTVPFVSKATGVPLAKVAARVMAGKTLAEQGVTEEVIPPYYSVKEVVLPFNKF
QGVDPILGPEMRSTGEVMGVGRTFAEAFSKAMLGAQSNMKKSGRALLSVREGDKKRIVDL
AAKLQKFGFELDATHGTAVVLGEAGINPRLVNKVHEGRPHIQDRLKNGEYSYIVNTTAGR
QAIEDSKLIRRSALQYKVHYDTTLNGGFATAMALNADPTEQVISVQEMHAQIKAM
NT seq
3228 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaacgtacagacctaaaatccatcctgattcttggtgccggtccgattgtgatc
ggccaggcctgcgaatttgactattccggtgcgcaggcatgtaaagcgctgcgtgaagag
ggctaccgcgtcattctggtgaactctaatccggcgacgattatgaccgacccggaaatg
gccgatgcaacctacattgagccgattcactgggaagtggtgcgcaaaatcatcgaaaaa
gagcgcccggatgcggtgctgccaacgatgggcggtcagacggcgctgaactgtgcgctg
gagctggagcgtcatggcgtactggaagagtttggcgtcaccatgattggcgcgacagct
gatgctatcgacaaagcggaagatcgccgtcgtttcgacgtggcaatgaaaagcatcggt
ctggataccgcgcgatccggtattgcgcacaccatggaagaagcgctggccgtggcagaa
gatgtcggcttcccgtgcatcatccgtccctcctttaccatgggcggcaccggtggcggc
atcgcctataaccgcgaagagtttgaagagatttgcgaacgcggtctcgacctctctccg
accaatgagctgctgattgatgagtcgctgattggctggaaagagtatgaaatggaagtg
gtgcgcgataagaacgataactgcatcattgtctgctccattgaaaacttcgacgcgatg
ggcattcacactggtgactccatcacggtcgcgcctgcccagacgctgaccgacaaagag
tatcagatcatgcgtaacgcctcgctggcggtactgcgtgaaatcggtgttgaaaccggt
ggctcaaacgtgcagttctcggttaacccgaaagatggtcgcctgattgtcattgagatg
aacccacgcgtgtcgcgctcttcggcgctagcctctaaagcgactggcttcccgattgcg
aaagtggcggccaaactggcggtgggctacaccctcgatgagctgatgaacgatatcacc
ggcggcttaacgccggcctcgttcgagccgtcaatcgactacgtcgtcaccaagatcccg
cgtttcaactttgagaaatttgccggtgccaacgatcgcctgaccacgcagatgaagtca
gtgggtgaagtgatggcgattggccgcacattccaggaatcgatgcagaaagcgctgcgc
ggtctggaagtgggcgctaatggctttgatccgaaagtgcacctcgacgatccggaagca
ctaacccgcatccgccgcgagttgaaagatgccggttcagaccgcatctggtacatcgcg
gacgctttccgcgctggcatgtcggttgatggcgtgttcaatctgaccaacattgaccgc
tggttcctggtgcagattgaagagctggtgcggctggaagatcaggtggcaagcgaagga
gtgaatagcctggatgccacgttcctgcgtatcctgaagcgcaaaggttttgctgatgcg
cggctggcgacgctggcgggtgtggcagagagcgaaatccgcaagctgcgtcagcagttt
aacctgcatccggtttataagcgtgtggacacctgcgccgccgagttcgccaccgacact
gcctacatgtactccacctatgaggaggagtgcgaagccaacccgagtccggatcgcgaa
aaaatcatgattctgggtggtggacccaaccgtatcggtcagggtatcgaattcgactac
tgctgcgttcacgccgctctggcgctgcgtgaagacggttaccagaccattatggtcaac
tgtaacccggaaacggtttcgactgattatgacacctccgatcgcctctacttcgagccg
gtcacgctggaagatgtgctggagattgtgcgcattgagcagcctaaaggcgtcatcgta
cagtatggcggtcagaccccgctgaaactggcgcgtgcgctggaagccgcaggcgtgccg
gttatcggcaccagcccggattccattgaccgtgcggaagaccgtgaacgtttccagcag
gcggttgatcgcctgaaactgaagcaaccggctaacgccacggtagcgacgctggagcag
gcagtcgagaaagccgctggcctgggttatccgctggtggtgcgtccttcttatgtgctg
ggcggccgtgccatggagatcgtctacgacgagatcgacctgagacgctacttccagacg
gcggtctcggtttccaacgatgcgccggtgctgctggatcgcttcctggatgatgcggtc
gaagtggatgtggatgcgatttgcgacggtgagcgcgtgctgataggcggtatcatggaa
cacatcgagcaggcaggcgttcactccggtgactccgcctgttcactgccggcctacacg
ctgaatcaggagattcagaacgtgatgcgccagcaggttgagaaactggcgtttgagctg
aacgttcgtggcctgatgaacgttcagttcgcggtgaaagacaatgaagtctatttgatc
gaagttaacccacgtgcggcacgtaccgttccgttcgtctctaaagcgaccggcgtaccg
ctggcgaaagtggccgcgcgcgtgatggcaggtaaaacactggcagagcagggcgtgacg
gaagaggtgattccgccttactactcggtcaaagaagtggttctgccgttcaacaagttc
cagggcgttgacccgattctgggaccagaaatgcgttctaccggtgaagtcatgggcgtg
ggccgcacgttcgctgaggcattctccaaagcgatgctgggcgcacaaagcaacatgaag
aagtcgggccgtgcgctgctgtcggtgcgtgaaggcgacaagaaacgtatcgtcgacctg
gccgctaagctgcagaagtttggtttcgaactggatgcgactcatggcacggcggtggtg
ctgggcgaagcgggcattaatccgcgcctggttaacaaggtgcatgaaggtcgtccgcac
attcaggaccgcctgaagaatggcgagtatagctatatcgtcaataccacggcgggtcgt
caggcgattgaagattcgaagctgattcgccgcagcgcactgcagtataaagtgcactac
gataccacactgaatggcggcttcgcgaccgcgatggcgctgaatgctgacccgacggaa
caggttatctccgttcaggaaatgcatgctcagataaaggcgatgtaa
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