Pantoea vagans FDAARGOS_160: AL522_07455
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Entry
AL522_07455 CDS
T04302
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
pagg
Pantoea vagans FDAARGOS_160
Brite
KEGG Orthology (KO) [BR:
pagg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pagg03021
]
AL522_07455
Transcription machinery [BR:
pagg03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
AL522_07455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
SNF2-rel_dom
Helicase_C
ResIII
DEAD
Cas3-like_C_2
AAA_34
Helicase_RecD
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
AMG57478
LinkDB
All DBs
Position
complement(884147..887053)
Genome browser
AA seq
968 aa
AA seq
DB search
MVFTLGQRWISDTESELGLGTVVAIDTRMITLLFPATGENRLYARNDSPVTRVIFNPGDT
ITSHEGWQMRVDEVRNENDLMTYIGTRLDTEESDVMLREVMLDSKLVFSKPQDRLFAGQL
DRMDRFALRFRARKYQSEQYRLPISGLRGMRTNLIPHQLHIAQDVGRRHAPRVLLADEVG
LGKTIEAGMIIQQQLLAGRAERVLIVVPETLQHQWLVEMLRRFNLRFALFDDDRYTEAQH
DSDNPFETEQLIICSLDFVRRNKQRLEMLADAEWDLLVVDEAHHLAWSEGEPSREYQVIE
KLAEKTAGVLLLTATPEQLGMESHFARLRLLDPDRFHDFAAFVEEQQHFRPIADAVTALL
ADNAISQEEMNRINDLVGEQDIEPLLQVANSDRDGKLEARQELIAMLMDRHGTSRVLFRN
TRNGVKGFPKRELHQIRLPLPAQYQTAIKVSGIMGTRKSAEERARDLLYPEQIYQEFEGD
SGTWWNFDPRVEWLMGYLTSNRKEKVLVICAKAATALQLEQVLREREGIRAAVFHEGLSI
IERDRAAAWFASEENGAQVLLCSEIGSEGRNFQFASRLVMFDLPFNPDLLEQRIGRLDRI
GQAHDIQILVPWLEQTAQAVLLRWYHEGLDAFEHTCPTGRTIYDSVHSQLIGYLAAPENN
EGFDAFITDCRKQHDALKSQLEQGRDRLLELNSNGGESAQLLANAISEQDNDTGLVNFAL
NLFDIVGINQEDRSDNLIVLTPSDHMLVPDFPGLPEDGCTITFNRDQALSREDTQFITWE
HPLIRNGLDLILSGDTGSSALSLLKNKALPVGTLLVELIYVVEAQAPKHLQLTRFLPPTP
IRLLMDTKGTNLAGKVEFESFNRQLNAVNRHTASKLVNAVQQDVHAILTQAEESVVSEAR
AVIDAARAEANEKLGAELSRLNALKAVNPNIRDDEVEALESNREQVLESLDQANWRLDAL
RLIVVTHQ
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atggtttttacattaggtcagcgctggattagtgatacggaaagtgaactgggactgggc
accgtggtggcgatcgatacccgcatgatcaccctgctgtttccggccacaggggaaaac
cgcctctacgcccgcaacgattcgccggttacccgcgtcatctttaatccgggtgatacc
atcaccagccacgaaggctggcagatgcgcgtcgatgaagtacgcaacgaaaatgacctg
atgacctatatcggtacccggctggataccgaagaaagcgacgtgatgctgcgcgaagtg
atgctcgacagcaagctggtattcagtaagccgcaggatcgcctgtttgccggccagctc
gaccggatggatcgtttcgccctccgcttccgcgcccgtaaataccagagcgagcagtac
cgcctgccgatcagcggcttacgcggtatgcgcaccaacctgatccctcaccaactgcat
atcgcccaagatgtcggccgtcgccatgcgccgcgcgtgctgctggccgatgaagttggc
ctgggtaaaactattgaagccgggatgatcatccagcaacagctgctggcgggtcgtgct
gagcgtgttctgatcgtggtgcctgaaaccttacagcaccagtggctggtcgaaatgctg
cgccgcttcaacctgcgctttgcgctgtttgatgacgatcgctataccgaagcgcagcac
gacagcgataacccgtttgaaacggagcagctgattatctgctcgctggactttgtgcgc
cgtaacaaacagcgccttgagatgctggccgatgccgaatgggatctgctggtggtggat
gaagcgcaccatctggcctggtcagaaggcgagccaagccgcgaatatcaggttatcgaa
aagctggccgaaaaaactgccggcgttctgctgctgaccgcaacaccagagcagctgggt
atggagagccacttcgcccgtctgcgcctgctcgacccggaccgtttccatgactttgcc
gcctttgtagaagagcagcagcatttccgcccgattgccgatgccgtcacagcgctgctg
gcggacaacgcgatctcccaggaggagatgaaccggatcaacgatctggtcggcgagcag
gacatcgagccgctgctgcaggtcgccaacagtgaccgtgatggcaagctggaggcgcgt
caggagctgatcgccatgctgatggatcgccacggcaccagccgcgtactgttccgtaac
acccgtaatggcgttaaaggcttcccgaaacgtgagctgcatcagatccgcctgccgctg
cctgcacagtatcagacggcgattaaagtctccggcattatgggcacgcgcaaaagcgcc
gaggagcgggcgcgtgacctgctctatccggagcagatttatcaggaatttgaaggcgac
agcgggacctggtggaacttcgacccgcgcgtcgaatggctgatgggctatctcaccagc
aaccgtaaagagaaagtgctggtgatctgcgccaaagccgccaccgcgctgcagctggag
caggtgctgcgtgaacgtgaaggcatccgcgccgcggtgttccacgaaggtctgtcgatc
attgaacgtgaccgtgctgccgcctggttcgcctcagaagagaacggcgcgcaggtgctg
ctgtgctccgagatcggttcagaaggccgtaacttccagtttgccagccgtctggtgatg
ttcgacctgccgtttaacccggacctgctggagcagcgtatcggtcgtctggaccgtatc
ggtcaggcgcacgatattcagattctggtgccgtggctggagcagaccgcacaggcggtg
ctgctgcgctggtatcacgaagggctggacgcgtttgagcacacctgcccgaccggccgt
accatctatgacagcgtccattcacagctgatcggctatctggccgcgccggagaacaat
gaaggcttcgatgcgtttatcactgactgccgtaaacagcacgacgcgctgaaatcgcag
ctggaacagggtcgcgatcgcctgctggaactgaactccaacggcggtgaatcggcgcag
ctgctggccaatgctatcagcgagcaggataacgatactggcctggtgaacttcgcgctt
aacctgtttgatatcgtcggcatcaatcaggaagatcgaagcgataacctgattgtgctg
accccttccgaccacatgctggtgcccgatttccctggcctgccggaagatggctgcacc
attacctttaaccgcgatcaggcactgtcacgcgaggatactcagttcattacctgggaa
cacccgctgatccgtaacggtctggatctgatcctgtcaggcgataccggcagcagcgca
ctgtcactgctgaagaacaaggcgctgccggtggggacgctgctggtcgagctgatctat
gtggttgaagcgcaggcaccgaagcatctgcaactgacccgcttcctgccaccgacgcca
atccgtctgctgatggataccaaaggcactaacctggcgggcaaagtggagttcgaaagc
tttaaccgtcagctgaatgcggttaaccgtcacaccgccagtaaactggtgaatgcggtg
cagcaggatgtgcatgcgattctgacgcaggccgaagagagcgtcgtcagtgaagcgcgt
gcggtgattgatgcggcacgtgctgaagcgaacgagaagctgggtgccgagctttcgcgt
cttaacgcgctgaaagccgtcaacccgaacatccgcgacgatgaagttgaggcgctggaa
agcaaccgcgaacaggtgctggaaagtctcgaccaggccaactggcgtctcgacgcgctg
cgcctgattgtggtgacacaccagtaa
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