Pantoea vagans FDAARGOS_160: AL522_08640
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Entry
AL522_08640 CDS
T04302
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
pagg
Pantoea vagans FDAARGOS_160
Brite
KEGG Orthology (KO) [BR:
pagg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pagg03400
]
AL522_08640
DNA repair and recombination proteins [BR:
pagg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AL522_08640
Archaeal homologous recombinant proteins
AL522_08640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
AMG57695
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All DBs
Position
complement(1144090..1145289)
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AA seq
399 aa
AA seq
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MRIIHTADWHLGQFFYNKSRAAEHQAFLDWLLIQIEQHQVDALIIAGDLFDTGTPPSYAR
EMFNRFVVALQPAGCQLIVLAGNHDSVATLNESRELLACLNTRVIATPQAQDDVLLLNTR
QGEPGALLCAIPYLRPRDILRSRAGQSGRDKQTSLLEAIAHHYQQRFAAAQALGYALPVI
ATGHLTTVGVSQSDSVRDIYIGTLDAFPASAFPAADYIALGHIHRAQRVAGSEHIRYSGS
PIPLSFDELGTEKSVFLLELAASGLQSVTPLMVPQAQPMQVLKGSLAQIAEQLNAFSSAE
QEKPTWLDIEVTTQEYLSDLQRQVETLTATLPVEVLLLRRSREQRQQSLARLDNETLSEL
KVEEVFARRLALDEELQPAQIDEMIILFRQTLAAMEETQ
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgcgcattattcatactgcggactggcatctggggcagttcttctacaacaaaagtcgg
gcggcggaacatcaggcgtttctcgactggctgttgatccagattgaacagcatcaggtg
gatgcgctgattattgcaggcgacctgtttgataccggcacgccgcccagctacgcccgc
gagatgtttaaccgcttcgtggtggcgctgcagcctgcgggctgtcagctgattgtgctg
gcgggtaaccacgattccgtggcaacgctgaacgagtcacgcgaactgctggcctgtctc
aacacgcgggtaatcgctacaccgcaggcgcaggatgatgtgctgctgctcaacacccgc
cagggcgagccgggtgccctgctgtgcgccattccctatctgcgcccgcgcgatatcctg
cgcagccgggcgggtcagtcgggacgcgacaagcagacctcgctgctggaggcgattgcc
caccactatcagcagcgtttcgccgccgcccaggcgctgggctatgcgctgcccgtcatt
gctaccgggcatctcaccaccgttggcgtcagccagagcgattcagtgcgtgacatctat
atcggcacgctggatgcgtttcccgccagcgcgtttcccgctgctgattatattgcgctc
ggccatattcatcgcgcccagcgcgtggcgggcagcgagcatatccgctacagcggctcg
ccgattccgctgagctttgatgagctggggactgaaaaaagcgtcttcctgctggaactg
gcggccagcggcctgcagtcagtcacgccgctgatggtgccacaggcgcagccgatgcag
gtgctgaaagggtcgctggcgcagatagcggaacagctaaatgccttcagttcggcagag
caggaaaaaccgacctggctcgatatcgaagtcaccactcaggagtacctcagcgatctg
caacgtcaggtcgaaaccctgaccgctacgctgccggtcgaagtcttgctgctgcgccgc
agccgtgaacagcggcagcagagcctggcgcggctcgacaacgaaacgctgagtgagctg
aaggtggaagaggtctttgcccgccgcctggcgctggatgaggagctgcaaccggcgcaa
atcgacgagatgatcatcctgttccgccagacgctggccgccatggaagagacccaatga
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