Pantoea vagans FDAARGOS_160: AL522_09230
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Entry
AL522_09230 CDS
T04302
Name
(GenBank) DNA-binding protein HU-beta
KO
K03530
DNA-binding protein HU-beta
Organism
pagg
Pantoea vagans FDAARGOS_160
Brite
KEGG Orthology (KO) [BR:
pagg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pagg03032
]
AL522_09230
03036 Chromosome and associated proteins [BR:
pagg03036
]
AL522_09230
03400 DNA repair and recombination proteins [BR:
pagg03400
]
AL522_09230
DNA replication proteins [BR:
pagg03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
AL522_09230
Chromosome and associated proteins [BR:
pagg03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
AL522_09230
DNA repair and recombination proteins [BR:
pagg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
AL522_09230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
UBA_HYPK
Motif
Other DBs
NCBI-ProteinID:
AMG57808
LinkDB
All DBs
Position
1238254..1238526
Genome browser
AA seq
90 aa
AA seq
DB search
MNKSQLIDKIAADADISKAAAGRVLDAFMGSVSDALKEGDEVALVGFGTFSVRDRAARTG
RNPQTGKEITIPAGKVPGFRAGKAFKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
gtgaataagtcacaattgatcgacaaaattgctgccgatgctgatatttctaaagctgca
gcaggacgtgttttagatgcatttatgggctcagtttcagatgcgctgaaagagggtgat
gaagtggctctggtgggtttcggcacattctctgtgcgtgaccgcgctgcacgtaccggc
cgcaatccgcaaaccggtaaagagatcactatcccggcgggtaaagtacccggtttccgt
gctggtaaagcatttaaagacgctgtcaattaa
DBGET
integrated database retrieval system
