Pantoea vagans FDAARGOS_160: AL522_10950
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Entry
AL522_10950 CDS
T04302
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase accessory factor YcaO
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
pagg
Pantoea vagans FDAARGOS_160
Brite
KEGG Orthology (KO) [BR:
pagg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pagg03009
]
AL522_10950
Ribosome biogenesis [BR:
pagg03009
]
Prokaryotic type
ribosomal protein modification factors
AL522_10950
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Ortholog
Paralog
GFIT
Motif
Pfam:
YcaO
YcaO_C
Motif
Other DBs
NCBI-ProteinID:
AMG58111
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Position
complement(1588297..1590060)
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AA seq
587 aa
AA seq
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MTQTFIPGKDAALEDSIARFQNKLQDLGFNIEEASWLNPVPHVWSVHIRDRDCPLCFTNG
KGASKKAALASALGEYFERLSTNYFFADFWLGKKIANGDFVHYPNEKWFALPEDDSLPEG
ILDARLHAFYDADNALTASGLIDLQSGNAERGICALPFTRQSDQQTVYIPMNIIGNLYVS
NGMSAGNTANEARVQGLSEVFERYIKNRIIAEAISLPAIPDEVMQRYPDVIEAITRLEAE
GFPIFAYDASLGGKYPVICVVLFNPTNGTCFASFGAHPDFGVALERTVTELLQGRSLKDL
DVFTPPTFDDEEVAEHANLETHFIDSSGLISWDLFKETADYPFVDWSFAGSTEQEFATLM
AIFTSEDQEVYIADYEHLGVYACRIIVPGMSDIYPAEDLFLANNSMGAGMRETLVALPDS
NWNPEEYLDLIGQLDDEGFDDFTRVRELLGLATGKDNGWYTLRIGELKAMLALAGGDLDQ
ALIWTEWTMEFNSSIFTPERANYYRCLQTLLLLAMEDERDPLQYHHALLRMYGERAMEAA
SAAISGENPFNGLQAVDEELQAFPAHQSLLAAYEKLQAAKRHYWKKA
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgacgcaaacatttatcccgggcaaagatgccgcactggaagactccatcgcgcgtttc
cagaacaagctgcaggatcttggctttaatattgaagaagcctcctggcttaatcctgtt
ccccatgtctggtctgtgcatatccgtgaccgcgattgcccgctctgctttaccaatggt
aaaggcgccagtaaaaaagcggcactggcttctgcactgggcgagtattttgagcgtctc
tctactaactatttttttgctgacttctggctggggaaaaagatcgctaacggtgatttt
gttcactaccccaatgaaaaatggtttgcgttaccagaggatgattccttacctgaaggc
attctggatgcgcgcctgcatgcgttttacgatgccgacaatgctctgacggcttccggc
ctgattgatttgcagtccggcaatgctgagcgtggtatctgcgcgctgccctttacccgc
cagtccgatcagcaaactgtctatatcccgatgaacatcatcggcaacctctatgtctca
aatggcatgtcggcgggcaacaccgcgaatgaagcgcgtgttcaggggttgtcagaagtg
tttgagcgctacattaagaaccgaattattgctgaagcaatcagcctgccagcgattcct
gatgaggtgatgcagcgttatcctgacgtcattgaggcgattacgcgccttgaagcagaa
ggcttcccgattttcgcctatgacgcctcgctgggcggcaaatatccggttatctgtgtg
gtgctgtttaacccgaccaatggcacttgttttgcctcatttggtgcgcatcccgatttc
ggtgtggcgctggagcgtaccgttaccgagttgctgcagggtcgaagcctcaaagatctg
gatgtgtttacgccaccgacctttgatgacgaagaagtggctgaacatgccaaccttgaa
acgcacttcatcgattcaagcggtctgatctcatgggatctgtttaaagagacggcggat
tatccctttgtcgactggtctttcgcgggcagcactgagcaggaatttgctacgctgatg
gcaatcttcacttcagaagatcaggaagtctatatcgctgactacgagcacctgggtgtc
tatgcctgccgcatcatcgtacctggcatgtctgatatctacccggcggaagatttgttc
ctggcgaataacagcatgggtgctggcatgcgtgaaaccctggttgccctgcctgacagc
aactggaatccggaagagtatctggatctgattggacagctggatgatgaaggttttgac
gacttcacccgtgttcgcgagctgctgggcctggcaaccggtaaagacaacggctggtac
acgctgcgtattggcgaattaaaagcgatgctggcgctggcgggcggcgatctggatcag
gcattgatctggacagaatggacaatggagtttaacagctcaatctttacgccagagcgg
gctaattactatcgttgcctgcagaccctgctgttactggcaatggaagatgagcgcgat
ccgctgcagtatcatcacgccttactgcgcatgtatggtgagcgcgcaatggaagcggcg
tctgccgctatcagtggtgagaatccgtttaatgggcttcaggctgtggatgaagagttg
caggcatttccggcccatcaatccctgcttgctgcctacgaaaaactgcaagctgctaaa
cgtcattactggaaaaaagcgtaa
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