KEGG   Pantoea vagans FDAARGOS_160: AL522_12375
Entry
AL522_12375       CDS       T04302                                 
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
pagg  Pantoea vagans FDAARGOS_160
Brite
KEGG Orthology (KO) [BR:pagg00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pagg02044]
    AL522_12375 (tssC)
Secretion system [BR:pagg02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   AL522_12375 (tssC)
SSDB
Motif
Pfam: VipB VipB_2
Other DBs
NCBI-ProteinID: AMG58362
UniProt: A0AAN1NR17
LinkDB
Position
1871290..1872789
AA seq 499 aa
MTQTSQQPQSQGAASFSQDEFSALLNKEFRPKSDQARAAVESAVKTLAQQALENTVTVSS
DAYRTIQALIAEIDEKLSQQVNQIIHHPEFQSLESAWRGLSYLVNNTETDEMLKIRFMSI
SKQELGRTLKRYKGAGWDQSPLFKKIYEQEYGQFGGEPFGCLVGDYYFDHSPQDVELLGE
MARIGSAAHCPFITGTAPEVMQMESWQELANPRDLTKIFQNTEYAAWRSLRESEDARYLG
LVMPRFLARLPYGIRTNPVDSFDFEEQTDGSDHGNYTWSNAAYAMAANINRSFKEYGWCT
AIRGVESGGAVENLPCHTFPSDDGGVDMKCPTEIAISDRREAELAKNGFMPLVHRKNSDF
AAFIGAQSLQKPTEYHDADATANARLAARLPYLFACCRFAHYLKCIVRDKIGSFRERDEM
ERWLNDWVMNYVDGDPANSSQETKSRKPLAAAEVNVEEQEDNPGYYAAKFFLRPHYQLEG
LTVSLRLVSKLPSLKNDNA
NT seq 1500 nt   +upstreamnt  +downstreamnt
atgacgcagacttcacaacaaccccagtcgcagggcgcggccagtttcagccaggatgag
ttcagcgcgctgctgaacaaagagttccggccgaaaagcgaccaggcacgcgccgcggtc
gaaagcgcggtaaaaactttggcgcagcaggcgctggagaacaccgtcaccgtttccagc
gacgcctatcgcaccattcaggcgctgatcgcggagatcgacgaaaagctgtcacagcag
gtgaaccagattattcaccatccggagtttcagtcgctggagagcgcctggcgtggcctg
agctatctggtgaacaacaccgaaacggacgagatgctgaaaatccgctttatgagcatc
tccaagcaggagctgggtcgtacgcttaagcgttataaaggtgctggctgggatcaaagc
ccgctgttcaagaagatttacgagcaggagtatggtcagttcggcggcgagccgtttggc
tgtctggtgggcgactactacttcgaccacagcccgcaggatgttgagctgctgggtgaa
atggcgcgcatcggttcggcggcacactgtccatttatcaccggcaccgcgccggaagtg
atgcagatggaatcctggcaggagctggcgaatccgcgcgatctgaccaaaatcttccag
aacaccgaatatgctgcctggcgcagcctgcgtgagtcggaagatgcacgctatctgggc
ctggtgatgccgcgtttcctggcgcgtctgccatatggcattcgtaccaacccggtcgat
agcttcgattttgaagagcagaccgacggttccgatcacggcaactacacctggagcaat
gcggcgtacgcgatggccgccaacatcaaccgctcctttaaggagtatggctggtgtacc
gcaatccgcggcgtggaatcgggcggggcggttgagaacctgccgtgccataccttcccg
agcgacgacggcggcgtggacatgaagtgtccgaccgaaatcgccatcagcgatcgccgc
gaagccgaactggcgaaaaacggctttatgccgctggtgcatcgcaaaaactctgacttc
gccgcctttatcggtgcgcagtcactgcagaagccgacggaatatcacgacgccgatgcc
accgccaatgcccgtctggccgcgcgtctgccttatctgttcgcctgctgccgcttcgcg
cattacctgaagtgcatcgtgcgcgacaagatcggctccttccgcgagcgcgatgagatg
gaacgctggctgaacgactgggtgatgaactacgtcgatggcgatccggctaactcctcg
caggagaccaagtctcgtaagccgctggccgctgccgaggtgaatgtggaagagcaggag
gataatccaggctattacgccgcgaaattcttcctgcgtccgcactaccagctggaaggt
ctgaccgtttcgctgcgtctggtctctaagctgccgtcactgaaaaatgacaatgcataa

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