KEGG   Pantoea vagans FDAARGOS_160: AL522_12395
Entry
AL522_12395       CDS       T04302                                 
Name
(GenBank) Hcp1 family type VI secretion system effector
  KO
K11903  type VI secretion system secreted protein Hcp
Organism
pagg  Pantoea vagans FDAARGOS_160
Pathway
pagg03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pagg00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    AL522_12395
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pagg02044]
    AL522_12395
Secretion system [BR:pagg02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   AL522_12395
SSDB
Motif
Pfam: T6SS_HCP
Other DBs
NCBI-ProteinID: AMG58366
LinkDB
Position
1874319..1874801
AA seq 160 aa
MAIDMFMKVDGVTGESKDSNHTGWTDITSFSWGASQPGNMSVGGGGGAGKVNFNDLHVNA
LIDKSTTALLKNCASGKHLAKVELSICKAGGSQVEYARITLEDVLVTAVNYNGSDNGDTL
GMTYSFQASKVKQQYWEQSSSGGKGAESSAGWDIKGNKEA
NT seq 483 nt   +upstreamnt  +downstreamnt
atggctattgatatgtttatgaaggttgacggagtcaccggcgagtctaaagactctaac
cacactggctggaccgatattacctctttctcatggggtgcctctcagccaggcaacatg
tctgttggcggcggcggcggtgccggtaaagttaacttcaacgacctgcacgtgaatgca
ctgatcgacaaatcgaccacggcgttgctgaagaactgcgcaagcggtaaacatctcgct
aaagtcgaactctctatctgtaaagcgggtggctctcaggttgagtatgcgcgcatcacc
ctggaagacgttctggtgaccgctgtgaattacaatggctccgacaacggcgataccctg
ggaatgacctactccttccaggcttctaaagtgaagcagcagtactgggagcagagctct
tccggtggcaaaggcgcagagagcagcgcaggctgggacatcaaaggcaataaagaagcg
taa

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