Pantoea vagans FDAARGOS_160: AL522_14630
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Entry
AL522_14630 CDS
T04302
Name
(GenBank) cyclic di-GMP phosphodiesterase
KO
K14051
c-di-GMP phosphodiesterase Gmr [EC:
3.1.4.52
]
Organism
pagg
Pantoea vagans FDAARGOS_160
Pathway
pagg02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pagg00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AL522_14630
Enzymes [BR:
pagg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
AL522_14630
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GFIT
Motif
Pfam:
EAL
GGDEF
PdeR_N
PAS_9
PAS
PAS_4
PAS_10
Motif
Other DBs
NCBI-ProteinID:
AMG58766
LinkDB
All DBs
Position
2358251..2360236
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AA seq
661 aa
AA seq
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MTDEHGQTLLYTLFGTTSPHWRLTADSDALHFAEDESSQTNIALPLTPGQAAMIRAMPVI
TSSINLTMTLQGIDVPMHFVGRKVNQASWAGTASAWGDTSAVARDLTLGLSFAEQVVSEA
NSVIVILDQRGNIQRFNRLSEEYTGLNEHEVIGRNVFQLFMTKQEASHSRRNIAGFFRDG
NSYEVERWVKTKKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRVLANTD
TVTGLPNRNAIHQQISLALERSEGDETGVVYLDLDNFKKVNDAYGHMFGDQLLQAVSLAI
LSCLGKDQTLGRLGGDEFVVLAEHTSQAALEAMSSRILERLRQPFRIGLIEVYSGCSIGI
AFAPLHGNDRESLIRNADTAMYHAKENGRGKFCVFAAEMNQRVFEYLWLDTNLRKALELD
HLLVHYQPKIDSDGQVRSAEALVRWNSPERGLVSPADFIPYAEESGLIVPLGRWVMLNVL
KQIIAWREQGIFLRVAVNVSARQLIDQSIYTDLKQALHEANITDCPIDIELTESCLIENE
TEALKLMKQFQELGAQVHLDDFGTGYSSLSQLARVPINAIKLDQSFIRDINKQPVSQSLV
RAIVAVAKALDLQVIAEGIETPDEEKFVLKSGVDGRQGYYYAKPMPAELFGHWLAKHPAR
V
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatgaacacgggcaaacgttgttgtacactctttttggtacaacaagccctcat
tggcgtctgaccgcggacagcgatgcgttgcattttgccgaagatgagtcatcacaaacc
aatatcgccctgccgctgacccccggccaggccgcaatgatccgcgcgatgccggtcatc
acctcaagcatcaatctgacgatgacccttcagggcattgacgtgccgatgcattttgtc
ggacgtaaagtgaaccaggcttcttgggccggcacagcctctgcctggggcgatacatct
gcagttgcccgcgatttaaccctggggctgtcgttcgccgaacaggtggtttctgaagct
aattcggtgattgtaatcctcgatcagcgcggtaatattcagcgttttaatcgtctgagt
gaagaatataccggcctgaatgagcacgaggttattggccgtaacgtctttcagcttttt
atgaccaaacaggaagcctcacattcacgacgcaacattgcgggcttcttccgtgacggc
aactcatatgaggttgagcgctgggtcaaaaccaaaaaaggtcagcgactgtttctattt
cgtaataagtttgttcacagcggcagtggcaaaaatgaaattttcctcatctgttctggc
acagacatcaccgaggagcgacgcgcccaggaacgtctgcgggtgctggcaaacaccgat
acagtgaccggtttacccaatcgcaacgccattcatcaacagattagcctggcgctagag
cgatccgagggtgatgagaccggcgtagtttacctcgacctcgataattttaagaaagtg
aacgacgcctacggtcatatgttcggcgatcagttactgcaggcagtttcactggccatc
cttagctgtctgggtaaagaccagaccctgggccgtctgggtggcgacgaatttgtagtg
ctggctgagcacaccagccaggcggcgcttgaggctatgtcttcccgtattcttgagcgg
ctgcgtcagcctttccgtatcggactgatcgaagtttacagcggctgttctattggcatc
gctttcgcgccgctgcatggcaacgatcgcgagagcctgattcgcaacgcggacaccgcg
atgtatcacgccaaagagaacgggcgtggcaagttctgcgtgtttgcggcagagatgaac
cagcgggtctttgagtatctgtggctggatactaacctgcgcaaggcgctggaactggat
catctgctggtacactaccagccaaaaatcgacagcgatggccaggtccgcagcgctgaa
gcactggtgcgctggaactcaccagagcgtggtctggtctcgcccgctgactttattccc
tatgctgaagagtcagggctgattgtgccgctgggacgctgggtcatgctcaacgtgctg
aagcagattatcgcctggcgtgagcaaggaatttttctgcgcgtcgccgtcaacgtttcg
gcccgtcagctgattgatcagagcatctacactgacctgaaacaggcactgcacgaggct
aatatcaccgactgtcccatcgatattgagctaaccgaaagctgcctgattgagaatgaa
actgaagcgctaaagctgatgaagcagtttcaggaactgggcgcacaggtgcacctggat
gactttggcaccggttactcctcgctttctcagctggcacgcgtgccaatcaatgccatc
aaactcgaccagagctttatccgcgatattaacaagcagccggtttcacaatcgctggtg
cgtgctatcgtcgccgtcgccaaggcgcttgatttgcaggtcatcgctgagggtattgag
accccggatgaagagaagtttgtcctcaaaagtggtgttgatgggcgtcagggttactat
tacgcaaaaccaatgcccgcggaactatttgggcattggctggctaagcatcctgcccgc
gtttaa
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