Pantoea vagans FDAARGOS_160: AL522_15095
Help
Entry
AL522_15095 CDS
T04302
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
pagg
Pantoea vagans FDAARGOS_160
Brite
KEGG Orthology (KO) [BR:
pagg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pagg03016
]
AL522_15095
Enzymes [BR:
pagg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
AL522_15095
Transfer RNA biogenesis [BR:
pagg03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
AL522_15095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
Motif
Other DBs
NCBI-ProteinID:
AMG58850
LinkDB
All DBs
Position
complement(2451217..2452338)
Genome browser
AA seq
373 aa
AA seq
DB search
MNYSLIDQDEQLADVCQKARQHAAVALDTEFVRTRTYYPQLGLIQLFDDHQLVLIDPLNI
RDWSPFIALLTDTSVTKFLHAGGEDLEVFLHRFGVLPTPMIDTQILAAFSGQPLSWGFAS
MVAHFTQVELDKSESRTDWLARPLTQRQCEYAAADVHYLLPIARQLMINTEEAGNVAAAL
SECDNLCQRRLDSLSPEEAWRDITNGWQLRPRQLAALQRLAAWRLKLAREKDMAVNFVVR
EEHLWKVARFMPGSLGELDQLGLSGHEIRFHGKTLVALVAEAEALDENELPAPLGNLIDH
PHYKQVFKAMKALVQQVSEQSGFSQELLASRRQINQVLSLHWGLKPQGRQPELLTGWRGE
LLKPGIEEILAGC
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
gtgaactattcccttatcgaccaggatgaacaactggctgacgtgtgccagaaagcccgc
cagcatgcagcggtagcactggacaccgaatttgtccgcacccgcacctactaccctcag
cttggcctgatccagctgttcgacgatcaccagcttgtgttgattgacccgctgaatatc
cgtgactggtcaccctttattgccctgctgaccgacactagcgtgactaaattcctgcat
gccgggggagaagatctggaagtcttcctgcaccgtttcggcgtgctgccgacgccgatg
atcgacacccagattctggcagccttctccggccagcctctctcctggggctttgcttcc
atggtggcgcatttcacgcaggtcgagctggataaaagtgaatcacgtaccgactggctg
gctcgccctttgacccagcgtcagtgcgagtatgcggcggcggacgttcactatctgctg
ccgattgcccgtcagctgatgattaacacggaagaggccggcaacgtggcggcggcactg
agtgagtgcgataacctgtgtcagcgccgtctggatagcctgtcgccggaggaagcctgg
cgggatatcaccaacggctggcaactgcgtccgcgtcagctggcggcactgcaacgactg
gcggcctggcgtctgaagctggcgcgtgaaaaggatatggcggttaattttgtggtgcgc
gaagaacatctgtggaaagtggcgcgctttatgcctggctctctgggtgagctggatcag
ctggggctgtcaggccacgaaatccgtttccacggtaaaacgctggtggcgctggtggct
gaagcagaggcgcttgacgagaatgaactgccggctccgctgggcaatttgatcgaccat
ccgcattacaagcaggtgtttaaggcgatgaaggcgctggtgcagcaggtgagcgagcag
agcggattcagccaggagttactggcatcgcgacgtcagattaatcaggtgttaagcctg
cactggggcctgaagccacagggacgtcagccggagctacttaccggatggcggggcgaa
ttgctgaaacccggcattgaggaaattctcgcggggtgttaa
DBGET
integrated database retrieval system
