Pantoea vagans FDAARGOS_160: AL522_15100
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Entry
AL522_15100 CDS
T04302
Name
(GenBank) long-chain-fatty-acid--CoA ligase FadD
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pagg
Pantoea vagans FDAARGOS_160
Pathway
pagg00061
Fatty acid biosynthesis
pagg00071
Fatty acid degradation
pagg01100
Metabolic pathways
pagg01212
Fatty acid metabolism
pagg02024
Quorum sensing
pagg04146
Peroxisome
Module
pagg_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pagg00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
AL522_15100
00071 Fatty acid degradation
AL522_15100
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
AL522_15100
09145 Cellular community - prokaryotes
02024 Quorum sensing
AL522_15100
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pagg01004
]
AL522_15100
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pagg04147
]
AL522_15100
Enzymes [BR:
pagg01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
AL522_15100
Lipid biosynthesis proteins [BR:
pagg01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
AL522_15100
Exosome [BR:
pagg04147
]
Exosomal proteins
Exosomal proteins of breast milk
AL522_15100
Exosomal proteins of breast cancer cells
AL522_15100
BRITE hierarchy
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GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
DUF4235
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
AMG58851
LinkDB
All DBs
Position
complement(2452437..2454146)
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AA seq
569 aa
AA seq
DB search
MEIQHNYRGGSLNKVWLKRYPADVPAEISADRYTSLVDLFEQAAKRYADQPAFLNMGQKM
SYRQLEEKSRAFAAYLQNQLGLKAGDRVALMMPNLLQYPVALFGVLRAGMVVVNVNPLYT
PRELKHQLNDSGVSAIVIVSNFAHTLEKVVAETAVRHVILTRMGDQLAPIKATLVNFIVK
YIKKLVPKYHLPGAISFRQVLEVGATLNYQRPTVSNDDLAFLQYTGGTTGVAKGAMLTHR
NMQANLEQTRATYGKVLRDGKEFVVTALPLYHIFALTVNGLLFLELGGQNLLITNPRDIP
GFVKELGKVPFTAITGVNTLFNALLNDEQFNKLDFSTLRLSAGGGMAVQKVVAERWEKLT
GHYLLEGYGLTECSPLVSVNPYDISCHTGSIGLPVPSTDVRILDDAGNEVPPGEPGELCI
SGPQVMLGYWQHPEATAEVLKNGWLHSGDIVTVDEEGFIRIVDRKKDMILVSGFNVYPNE
IEDVLMQHPKVREAAAIGVPSDLSGEAVKVCIVKKEASLTKEEVLDHCRRQLTGYKVPKI
IEFRDELPKTNVGKILRRELRDEAKPGAN
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atggaaatacaacataattatcggggtggatccttgaataaggtttggctgaaacgctac
ccggcagatgtgcctgccgaaataagtgcagatcgttacacctcgctggtggatctgttt
gagcaggccgcaaaacgctacgccgatcaacctgcgttcctgaacatgggtcagaagatg
agttatcgtcagctggaagagaagagccgtgcctttgctgcttatctccagaatcagctg
ggcctgaaggcaggtgaccgggtagcgctgatgatgcctaacttactacagtatccggtg
gccctgtttggtgtgttgcgtgccggtatggtggtggtcaacgtgaatccgctctacacg
ccgcgtgagctgaagcatcagctcaacgacagtggtgtcagcgccatcgttatcgtctct
aattttgcgcatacgctggaaaaagtggtcgcggaaaccgctgtgcggcatgtcatcctg
acccggatgggcgatcagctggcaccgattaaagccacactggttaactttatcgtcaag
tatattaagaagctggtgccgaaataccatttaccgggtgccatttcgtttcgccaggta
ctggaagtgggtgccacgctcaattatcagcgaccgacggtttcgaatgacgatctcgcc
ttcctgcaatacacgggcggcaccaccggcgtggcaaaaggggcgatgctgacccatcgc
aacatgcaggcgaacctggagcagacccgcgcgacctacggcaaagtgctgcgtgacgga
aaagaatttgtggtcaccgcgctgccgctttatcacatcttcgctttaaccgtgaatggc
ctgctcttcctggagcttggcggtcagaatctgctgatcactaatccccgcgatattccc
ggcttcgtcaaagagctgggtaaagtgccgtttacggcgattaccggcgtgaatacgctg
tttaatgcgctgctcaacgatgagcagttcaataaactcgatttttcaacgctgcgtctc
tctgcgggtggcggaatggcggtgcagaaagtggtggctgagcgctgggaaaagctcacc
ggacactatctgctggaaggctatggcctgaccgaatgttcgccgctggtatcagtcaat
ccgtatgacatcagctgccatacgggcagtatcggcctgccggttccttcaaccgacgta
cgcattctggatgatgccggaaacgaagtgccgccgggtgagccaggcgaactctgtatc
agcggtccgcaggtgatgctgggctactggcagcatccggaagcgacagcggaagtgctg
aaaaatggctggctccacagcggtgatattgttaccgttgacgaggaagggtttattcgc
atcgtagaccgcaaaaaagatatgattctggtctcaggctttaatgtctatccgaatgag
attgaagatgtactgatgcagcacccgaaagtacgtgaagccgcggcaattggcgtaccc
agcgatctgtcaggtgaagcggtaaaagtctgcattgtgaaaaaagaggcgtcgctgacc
aaagaagaggtgctcgatcactgccgccgccagctgactggttacaaggtgccaaaaatc
attgagtttcgtgatgagctaccgaaaaccaatgtgggcaagatcctgcgacgtgagctg
cgcgacgaggcgaagcccggcgcgaactga
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