Pantoea vagans FDAARGOS_160: AL522_15945
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Entry
AL522_15945 CDS
T04302
Name
(GenBank) very short patch repair endonuclease
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
pagg
Pantoea vagans FDAARGOS_160
Brite
KEGG Orthology (KO) [BR:
pagg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pagg03400
]
AL522_15945
DNA repair and recombination proteins [BR:
pagg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
AL522_15945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vsr
MTES_1575
STAG
Motif
Other DBs
NCBI-ProteinID:
AMG59006
UniProt:
A0AAN1NS97
LinkDB
All DBs
Position
complement(2625750..2626229)
Genome browser
AA seq
159 aa
AA seq
DB search
MADVHSSETRSKNMRAIRAQDTAIEQRIALLLKDRGFSFRVQDKNLPGRPDFVLTEQQAI
IFVHGCFWHRHHCYLFKLPATRTEFWTGKINSNVERDRRYVRQLQESGWKVLIIWECALR
GKLRLADQDLLERLEEWLLAMSESAEIDHQGIHHYNADC
NT seq
480 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgttcactccagcgaaacacgcagcaaaaatatgcgtgccattcgcgctcag
gatacggccattgagcaacgtattgcgctgttgctgaaagatcggggcttcagctttcgc
gtgcaggataaaaacctgccgggacggcctgattttgtgctgactgaacagcaggcgatt
atttttgttcatggctgcttctggcatcgtcatcactgctatctgtttaagctgccggcg
acgcgcacggaattctggaccggaaaaatcaacagcaatgttgaacgtgaccggcgttat
gtgcgccagctgcaggaaagcggctggaaagtgctgatcatctgggagtgtgcgctacgt
ggcaaactgcgcctggcggatcaggatctgctggaacggctggaggagtggttgctggcg
atgtcggagagtgccgaaatcgaccatcagggcattcatcattacaacgcggattgctaa
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integrated database retrieval system
