Pantoea vagans FDAARGOS_160: AL522_17675
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Entry
AL522_17675 CDS
T04302
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
pagg
Pantoea vagans FDAARGOS_160
Brite
KEGG Orthology (KO) [BR:
pagg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pagg03016
]
AL522_17675
Enzymes [BR:
pagg01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
AL522_17675
Transfer RNA biogenesis [BR:
pagg03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AL522_17675
Prokaryotic type
AL522_17675
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
AMG59317
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All DBs
Position
complement(3048366..3049169)
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AA seq
267 aa
AA seq
DB search
MSDGQTQKLALGIEYDGSRYYGWQRQNEVRSVQEKVERALSKVADHPVSIFCAGRTDAGV
HGTGQVVHFETTSQRPDGAWTLGVNANLPADIAVRWVKAVPDEFHARFSATARRYRYLIY
NQRLRPAVLAQGVTHFYHPLDAEKMQRAGQCLLGENDFTSFRAVQCQSRTPWRNVIHLNV
TRQGPYVIVDIKANAFVHHMVRNIVGSLMEIGCGNKPESWMATLLAAKDRTLAAATARAE
GLYLVAVDYPSHFALPQPSMGPLFLAD
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatggtcagacgcaaaaactggcgctcggcatcgagtatgacggcagccgttac
tacggctggcagcgccagaatgaagtccgcagcgtgcaggagaaagtagagcgcgcgctg
tcaaaagtcgccgatcatccggtcagcattttttgcgctggccgcaccgatgcgggcgtg
cacggcacagggcaggtagtccattttgaaaccacatcgcagcggcctgatggggcctgg
acgctgggcgtcaacgccaatctgccggcagatattgcggtgcgctgggtgaaagcggtg
ccggatgaattccatgcccgcttcagcgccacggcccgacgctatcgctacctgatctac
aatcagcgtctgcgtccggcggtgctggcgcagggcgtgacgcacttttaccatccactg
gatgcggagaagatgcagcgcgccgggcaatgtttgttaggcgagaatgatttcacctca
ttccgcgcggtgcagtgccagtcacgcacaccctggcgcaacgtgattcacctcaacgtg
acgcgtcagggcccctacgtgattgtggatataaaagccaacgcgtttgtgcatcacatg
gtgcgcaatatcgtgggcagcctgatggagataggctgcggcaataagccggagtcatgg
atggcaacgctgctggcggcgaaggatcggacattagccgcagccacagcccgggcagag
gggttgtatctggtggcggtggattacccatcccactttgcgttaccacagccgtcgatg
ggacccttgttcctcgcggattaa
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