Pantoea vagans FDAARGOS_160: AL522_17765
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Entry
AL522_17765 CDS
T04302
Name
(GenBank) fatty acid oxidation complex subunit alpha FadJ
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
pagg
Pantoea vagans FDAARGOS_160
Pathway
pagg00071
Fatty acid degradation
pagg00280
Valine, leucine and isoleucine degradation
pagg00310
Lysine degradation
pagg00362
Benzoate degradation
pagg00380
Tryptophan metabolism
pagg00410
beta-Alanine metabolism
pagg00640
Propanoate metabolism
pagg00650
Butanoate metabolism
pagg00907
Pinene, camphor and geraniol degradation
pagg00930
Caprolactam degradation
pagg01100
Metabolic pathways
pagg01110
Biosynthesis of secondary metabolites
pagg01120
Microbial metabolism in diverse environments
pagg01200
Carbon metabolism
pagg01212
Fatty acid metabolism
Module
pagg_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
pagg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
AL522_17765
00650 Butanoate metabolism
AL522_17765
09103 Lipid metabolism
00071 Fatty acid degradation
AL522_17765
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
AL522_17765
00310 Lysine degradation
AL522_17765
00380 Tryptophan metabolism
AL522_17765
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
AL522_17765
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
AL522_17765
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
AL522_17765
00930 Caprolactam degradation
AL522_17765
Enzymes [BR:
pagg01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
AL522_17765
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
AL522_17765
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
AL522_17765
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Motif
Other DBs
NCBI-ProteinID:
AMG59335
LinkDB
All DBs
Position
complement(3066077..3068173)
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AA seq
698 aa
AA seq
DB search
MEQNAFHLKMRLDHVGIITIDVPGEKMNTLKAEFAGQITAIIAEARRDPLLAGLVLISGK
ADNFIAGADISMIDRCQSAQEAEALAKQGQEVMAALDALPFPVVAAIHGACLGGGLELAL
ACDARICSLDDKTRLGLPEVQLGLLPGSGGTQRLPRLIGVQQALPLILTGKSLRAKQARK
LGVVDDAVPQAILLETAIARVKKGKVSGRTLPLRDRLLHGPVGRHALFALATRQTAAKTQ
GNYPAANRIIEVVRIGLEQGSRAGHDAEARAFGELAMTPESAALRGIFFATTVMKKERGG
EAEPAAVKRVAILGGGLMGGGIASVTAINAGLPVRIKDISLEGVNHALKTSWELLSKKVK
RRQLTPAQQQQQMARITGGIDYQGFSQRDVVIEAVFEDLALKQQMVSEVEAHCQPHTLFA
SNTSSLPIEEIAAKAQRPENVIGLHYFSPVDKMPLVEVIPHLNTSTATVVTIVALARSQG
KTPIIVADKPGFYVNRILTPYINEAMRCLLEGEPIDHIDRALVKAGFPVGPIQLLDEVGI
DVGSKISPILHQAYGERFAAPAAFDAVLKDGRKGRKNSKGFYRYDQPRWQRKKPDTSLYT
LLKVMPQARQSEAQIAERCMMMMLNEAARCLDEQVIRCARDGDIGAVFGIGFPPFLGGPF
HYMDKLGAAEVVNRLTRLTQQHGDRFTPCEALVEAARK
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atggagcagaatgcgtttcacctgaagatgcgactggatcacgttggcatcattacaatc
gatgtccctggcgagaagatgaacaccctgaaagcagaatttgccgggcagattaccgcc
atcattgcggaggcgcgacgcgatccgctgctggcaggcctggtgctgatttctggcaaa
gcggacaactttatcgcgggtgccgacatcagcatgatcgatcgctgtcagagcgcgcag
gaagccgaagcgctggcaaaacaggggcaggaagtgatggctgcgcttgatgcgctgcca
tttccggtcgtggcagcaatccatggtgcctgcctgggcggcgggctggaactggcgctg
gcctgcgatgcgcgcatctgctcgctggatgataaaacccgtctcggattaccggaagtg
caactcggcttactgcccggctccggtggcactcagcgactgccgcggttaattggcgtg
cagcaggcgctgccgctgattctgaccggcaaatcgctgcgggcaaaacaggcacgtaag
ctgggtgtggtcgatgacgcagtgcctcaggcgattctgctggagacggcaatcgcccgg
gtgaaaaagggtaaggtcagcggacgcacgctgccgctgcgcgaccgtctgctgcacggt
ccggttggccgtcatgcactgtttgcactcgcaacccgccagacagcagccaaaacccag
ggtaactatccggcggcaaaccgcattattgaagtagtacgcatcgggctggagcagggc
agccgtgccggacatgacgctgaagcgcgcgcttttggtgaactggcaatgacaccggaa
tccgcggcgctgcgcggaatctttttcgcgaccacggtcatgaagaaggagcggggtggc
gaggcggaacctgctgcggtgaagcgtgtcgcgattctcggtggcggtctgatgggcggt
ggcatcgccagcgtcaccgcaatcaacgccgggttgccggtgcgcatcaaagatatcagc
ctggaaggcgttaaccatgcgctgaaaaccagctgggaactgctgagcaaaaaggtcaag
cgacgccagctcactccggcacagcagcagcagcagatggcccggatcacgggcggcatt
gattatcaggggttctcacagcgcgatgtggtgatcgaagccgtgttcgaagatttagca
ctcaagcagcagatggtcagcgaagtggaagcccactgtcagccgcatacgctgtttgct
tctaacacctcttcgctgccgattgaagagatcgccgccaaagcacagcgtccggagaac
gtcatcgggctgcactacttcagcccggtcgataaaatgccgctggtggaagtgattccc
catctgaacacctccaccgcaacggtggtgaccattgtggcgctggcgcgcagtcagggc
aaaacgccgataatagtggcggacaagcctggcttctatgttaaccgcatcctgacgccc
tatataaatgaagcgatgcgttgcctgctggagggcgagccgattgaccatatcgatcgg
gcactggtgaaggctggttttccggtcggtccgattcagctgctggatgaggtaggcatc
gacgtcggcagcaaaatcagtcccatcctgcatcaggcttatggtgaacgctttgccgcg
cccgccgcttttgatgcggtgctgaaagatggccgcaagggacgtaaaaacagcaaaggc
ttttatcgctatgaccagccgcgctggcagcgtaaaaagccggatacctcactgtatacg
ttgctgaaggtcatgccgcaggccagacagagcgaagcgcagattgcggaacgctgcatg
atgatgatgctgaatgaggcggcccgctgccttgatgagcaggtcattcgctgtgcccgc
gatggcgatatcggtgcggtgtttggtatcggctttccgcctttcctgggggggccgttc
cattatatggacaaactgggtgcggcggaggtggtcaaccgattaacccgcctcacgcaa
cagcatggcgatcgatttacgccctgcgaagcgctggttgaggcggccagaaagtag
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