Pantoea vagans FDAARGOS_160: AL522_21725
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Entry
AL522_21725 CDS
T04302
Name
(GenBank) LacI family transcriptional regulator
KO
K05499
LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
Organism
pagg
Pantoea vagans FDAARGOS_160
Brite
KEGG Orthology (KO) [BR:
pagg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pagg03000
]
AL522_21725
Transcription factors [BR:
pagg03000
]
Prokaryotic type
Helix-turn-helix
LacI family
AL522_21725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_31
HTH_3
HTH_7
HTH_Tnp_ISL3
HTH_38
HTH_26
Motif
Other DBs
NCBI-ProteinID:
AMG60036
LinkDB
All DBs
Position
3879923..3880903
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AA seq
326 aa
AA seq
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MSIEKVAQLAGVSKATVSRVLNAHPGVKPDTREKVLAAISACDYQPNLLARQLRTAQSNM
LLVLISDITNPFCSRVVQGIEAEAELHGYHILLCNSASQLQREAAYLSLLTGKVVDGVIT
MDAASGLQDLQALIAGAPWVQCCEFNPDIPASSVSIDHLEAARDTVHYLAGKGRKRIGLV
NGDMRYLYSHHREKGYRQAIEELGYAWSGVSYTYEISPEAGSQGLRELMALPEPPDAVFA
VSDVLAVGVVHAALEAGLRVPEDLAVVGFDGVPFTRSLNPPLTTIEQPMNQLGARSVQLL
LQKIRNPNAPVIREVLPWTRVERASS
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatcgagaaagtcgctcagctggctggtgtatccaaagccacggtatcgcgggtt
cttaacgcgcatcccggtgtaaagcccgatacgcgtgagaaagttctggcggcaatctct
gcctgcgactatcagcccaatctgctggcgcgtcagctgcgtacggcgcaaagcaacatg
ctgctggtgctgatctcggatatcacgaatcccttctgttcacgcgtggttcagggcatt
gaggccgaagcggaactgcatggctatcatatcctgctctgtaactccgcctcgcagctt
cagcgcgaagccgcctatctgagtctgctgaccggcaaagtggtggatggcgtgattacc
atggatgcggcctccggcttacaggatttgcaggcgctgatcgccggagccccctgggtg
cagtgctgtgaatttaatcccgatattcccgcctcctcggtcagcattgatcaccttgaa
gccgcgcgcgacaccgtccattacctcgccggtaaagggcgtaaacgcatcgggctggtc
aatggcgacatgcgctacctctactcgcatcatcgtgaaaaaggctaccggcaggcgatt
gaggagctggggtatgcgtggtctggcgtctcttatacctatgaaatctctcctgaagca
ggcagtcaggggctgagggagttgatggcgctgccggaaccgccagatgcggtgtttgcg
gtatcagatgtactggcggtgggcgtggttcatgcggcgctggaagcaggtctgcgcgtg
ccggaagatctggcggtcgtcgggtttgatggcgtgccgtttacccgcagcctgaatcca
ccgctgaccaccattgagcagccgatgaatcagctcggcgcgcgcagcgtgcagctgctg
ctgcagaagatccgcaatccgaatgcgccggtcatccgtgaggtgctgccctggacgcgc
gttgaacgcgcatccagctga
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