Pantoea vagans FDAARGOS_160: AL522_22030
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Entry
AL522_22030 CDS
T04302
Name
(GenBank) LysR family transcriptional regulator
KO
K13928
LysR family transcriptional regulator, malonate utilization transcriptional regulator
Organism
pagg
Pantoea vagans FDAARGOS_160
Brite
KEGG Orthology (KO) [BR:
pagg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pagg03000
]
AL522_22030
Transcription factors [BR:
pagg03000
]
Prokaryotic type
Helix-turn-helix
LysR family
AL522_22030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
Motif
Other DBs
NCBI-ProteinID:
AMG60095
LinkDB
All DBs
Position
complement(3944308..3945243)
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AA seq
311 aa
AA seq
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MSDNINQEITFRKLSVFMMFMSKGNIARTAEALALSSVSVHRALHTLEEGIDCPLFIHKG
RNLVPLPAAWTLLDYCRDVTTLMGKGIEEARKVAGIGVGRLRLGTLYSLTLETIPRLIMG
MKLRRPTLELDLTMGSNQMLLNMLEDDALDAILIATDDGELSDVHFDVIPLFEDRIFLAA
PAGETREGTGPVDLRDFADRDFVSLAEGFATYTGSQEAFQIAGFEPRMVTQVNDIFSMIS
LVQAGIGLALIPGRMKKVYENNIQLLPLAEPYQMRQQIAIVYSHRRERDNDLLALAAEGR
MYARSLTDSAV
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacaacatcaatcaggaaattaccttccgcaagctcagcgtctttatgatgttt
atgagcaaggggaatatcgcccgcacggcggaagcgttagcgctgagcagcgtcagcgtg
catcgcgcgctgcacacgctggaagagggcatcgactgcccgctgtttatccacaaaggc
cgcaacctcgtgccgttgcctgccgcctggacgctgctggactactgtcgcgacgtgacc
accctgatgggtaaaggtattgaagaggcgcgtaaggtggcgggtatcggcgtaggtcgt
ctgcggctcggcacactttactcgctgacgcttgaaaccattccccggctgatcatgggc
atgaaactgcgtcggcccacgctggagcttgatctgaccatgggctctaatcagatgctg
ctgaacatgctggaagatgacgcgctggatgccattctaatcgccaccgatgatggcgaa
ctcagcgatgtgcattttgatgtgattccgctgtttgaagaccgtatctttctggctgcg
ccagccggggagacgcgtgagggaaccggcccggtggatttgcgtgattttgctgaccgt
gattttgtctcactggctgagggatttgccacctataccggttcgcaggaggcgtttcag
atagccggatttgaaccgcgtatggtcacgcaggtcaatgacatcttctcaatgataagt
ctcgtgcaggcgggcattggcctggcgctgatcccgggacggatgaagaaggtgtatgaa
aacaacattcagttgctgccgctcgctgagccttatcagatgcgtcagcagatcgcaatt
gtctactcacatcgtcgcgaacgcgataatgacctgctggccctggcggcagaagggcgg
atgtacgcccgcagccttactgactcagccgtttag
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