Pantoea vagans FDAARGOS_160: AL522_22190
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Entry
AL522_22190 CDS
T04302
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
pagg
Pantoea vagans FDAARGOS_160
Brite
KEGG Orthology (KO) [BR:
pagg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pagg03021
]
AL522_22190 (rpoH)
Transcription machinery [BR:
pagg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AL522_22190 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_10
KORA
HTH_AsnC-type
HTH_3
GntR
2Fe-2S_thioredx
Motif
Other DBs
NCBI-ProteinID:
AMG60126
UniProt:
A0AAN1NMR1
LinkDB
All DBs
Position
complement(3978236..3979093)
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AA seq
285 aa
AA seq
DB search
MTKEMQTLAIAPLGNLESYVRAANTWPMLSAEEEKALAERLHYQGDLEAAKTLILSHLRF
VVHIARNYSGYGLPQADLVQEGNIGLMKAVRRFNPEVGVRLVSFAVHWIKAEIHEYVLRN
WRIVKVATTKAQRKLFFNLRKTKQRLGWFNQDEVEMVARELGVSSKDVREMESRMAAQDM
TFDMSADDESSEGRSMAPVLYLQDKTSDFADGIEEDNWDAHAADKLSYAMEGLDERSQHI
IRARWLDEDNKTTLQELADQYGVSAERVRQLEKNAMKKLRMAIEA
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaagaaatgcaaactttagctattgctcctcttggcaacctggagtcttacgtc
cgggcggcgaatacctggccgatgctttcggcagaagaggaaaaagcgctggctgaacgg
ctgcattaccagggcgatctggaagcagctaagacgctgatcctgtcacacctacgcttt
gtagttcatatcgctcgtaattactccggctatggtctgccacaggctgacctggtccag
gaaggtaacatcggcctgatgaaagcagtgcgtcgcttcaaccctgaagtgggcgtgcgt
ctggtttcgttcgccgtgcactggattaaagcggagattcacgaatacgtgctgcgtaac
tggcgtatcgtgaaagtcgcgaccaccaaagcacagcgtaagctgttctttaacctgcgt
aaaaccaagcagcgtctgggctggttcaatcaggacgaagtcgagatggttgcgcgcgag
ctgggcgtaagcagcaaagacgtgcgcgaaatggaatcgcgtatggccgcgcaggatatg
acctttgatatgtctgccgacgacgagagcagcgaaggccgttctatggcaccggtgctg
tatctgcaggataaaacctctgactttgccgacggcatcgaagaggacaactgggatgcg
cacgcggctgacaagctgagctatgcgatggaaggtctggatgagcgtagtcagcacatc
attcgcgcccgctggctggacgaagacaataaaaccacgctgcaggagctggccgatcag
tacggcgtatccgccgaacgtgtccggcagctggaaaagaacgccatgaagaaactgcgt
atggcgattgaagcgtaa
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