Planktothrix agardhii: NIES204_01920
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Entry
NIES204_01920 CDS
T05658
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pagh
Planktothrix agardhii
Pathway
pagh00300
Lysine biosynthesis
pagh00470
D-Amino acid metabolism
pagh01100
Metabolic pathways
pagh01110
Biosynthesis of secondary metabolites
pagh01120
Microbial metabolism in diverse environments
pagh01230
Biosynthesis of amino acids
Module
pagh_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pagh00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
NIES204_01920 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NIES204_01920 (lysA)
Enzymes [BR:
pagh01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
NIES204_01920 (lysA)
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
BBD52934
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All DBs
Position
complement(253744..255132)
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AA seq
462 aa
AA seq
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MQNSGLQYLSASTDALETRSPNQQLFPLTAKVNSQDHLEIGGCDVTALVEQFGTPLYIVD
ETTLRTACQQYRDAFKRYYPGESLVLYASKAWNCLAICAIVAAEGLGIDVVSGGELYTAL
QAGVSPEKTYLHGNNKSLEEIQLAIENGCTVVADNWLDLHTLAKLSQGSIVDHPIRMMIR
FTPGIECHTHEYIRTGHLDSKFGFDPGQLDEVFKFISQQPGLSCVGIHAHIGSQIFELQP
HNDLGSVIIDTLMKANQQGLNISEVNIGGGLGICYTESDDPPSIDDWVKIVTESVIKACE
QKQYPLPKLLSEPGRSMIGSSCVTAYTVGSQKQVPGIRTYIAVDGGMSDNPRPITYQSLY
RVVLANKMSAPMTETVTVAGKHCESGDILIKDAQLPKVESGDILVVMATGAYNYSMASNY
NRLSKPAAVLVSNGDANVIIERESYQDLISKDRLPERLTINS
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
gtgcaaaattctggactgcaatacctatctgcatcaacggatgccttagaaacccgatcg
cctaatcaacaattatttcctttgacggcgaaagtcaattcgcaagatcacttagaaatt
ggtggctgtgacgttaccgctttagttgaacaatttggcacgcccctctatattgtcgat
gaaaccaccctgcgaacggcttgtcaacaataccgggacgccttcaaacgctattatccc
ggtgagtccctcgtcctgtatgcttccaaagcctggaattgtttagcgatttgtgctatt
gtagccgccgaaggattaggtattgatgtcgtatccgggggagaactctataccgccctc
caagccggagtttcaccggagaaaacctacctccatggtaacaataaatccttagaagaa
attcaattagcgattgaaaatgggtgtaccgttgttgccgataattggttagatttacac
accctcgctaaactcagtcaagggtctatagttgatcatccgattcggatgatgattcgg
tttaccccaggaattgaatgtcatacccatgaatatatccgtactggacatttagatagt
aaatttggttttgatcccggtcaactggatgaagtctttaaatttattagtcagcaaccg
ggtttatcctgtgttggcattcatgcccatattggctcccaaatttttgaattgcaaccc
cataacgatttaggttctgtaattattgatactttaatgaaagcaaatcaacagggctta
aatatttcagaagttaatattggtggtggtttagggatttgctatacggagtcagacgat
cccccaagtattgatgattgggtaaaaattgttactgaatccgtgatcaaagcctgtgaa
cagaaacaatatcccctaccgaaattattatctgaaccgggaaggtctatgattggctct
agttgcgttacagcttatacagtaggttctcaaaaacaagttcctggaattcggacttat
attgctgtagatggcgggatgtccgataacccccgtccgatcacctatcagtccttgtac
cgagtggttttagccaataaaatgtctgcacccatgaccgaaaccgttacggttgcagga
aaacattgtgaatctggggatattttaattaaggatgctcaacttcctaaagttgaatct
ggggatattctcgtggttatggcaacgggagcctacaattatagtatggcgtctaactat
aatcgactgtccaaaccggcggcagttttagttagtaatggtgatgctaacgtcattatt
gaacgagaatcttaccaagatttaattagtaaagatcgacttccagaacgcctaaccata
aattcttag
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