Planktothrix agardhii: NIES204_02080
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Entry
NIES204_02080 CDS
T05658
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pagh
Planktothrix agardhii
Pathway
pagh03030
DNA replication
pagh03430
Mismatch repair
pagh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pagh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NIES204_02080
03430 Mismatch repair
NIES204_02080
03440 Homologous recombination
NIES204_02080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pagh03032
]
NIES204_02080
03400 DNA repair and recombination proteins [BR:
pagh03400
]
NIES204_02080
Enzymes [BR:
pagh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NIES204_02080
DNA replication proteins [BR:
pagh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NIES204_02080
DNA repair and recombination proteins [BR:
pagh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NIES204_02080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
Intein_splicing
eIF3_N
Motif
Other DBs
NCBI-ProteinID:
BBD52950
LinkDB
All DBs
Position
269818..272496
Genome browser
AA seq
892 aa
AA seq
DB search
MSFVGLHIHSDYSLLDGASQLPQLIDRALELGMSAIAITDHGVMYGAIELIKTCRNKGIK
PIIGNEMYVINGDVKVQDEKNKKRRKYHQVVLAKNSQGYKNLVKLTTISHLEGFQGKGIF
ARPCINKELLEQYHEGLIVTSACLGGEIPQAILQGRYDVAREVAQWYQRVFGEDFYLEIQ
DHGSPEDRMVNVEIVKISRELNIKIIATNDSHFISCNDVEAHDALLCINTQKLISEEKRM
RYSGTEYLKSAEEMGQLFQDHLPNDIIQEAINNTVEVANKVEPYKGILGEPRIPDYPIPP
DHTADTYLEEVTWKGLLQRMNAKTRSEIKPVYKERLEYELKMMQQMGFSTYFLVVWDYIK
FARDNNIAVGPGRGSAAGSLVAYALKITNIDPVYHGLLFERFLNPERKSMPDIDTDFCIE
RRDEMIKYVTDKYGDDKVAQIITFNRMTSKAVLKDVARVLGISYKNSDKMAKLIPVSRGK
PARLKVMISDQSPAPEFKEAYDNEDVAIHNDAGDEVGTIKVKQWLDMAIRIEGTNKTFGV
HAAGVVISKQSLDEIVPLQRNNDGAVITQYYMEDLEAVGLLKMDFLGLKNLTMIQKAVDY
IEQKHHYKIDPEKLPSDIERKAQDAYKTHKKLPEDVQKTYKLLEKGDLDGIFQLESSGMM
DIVKKLKPSCLDDISSILALYRPGPLDAGLIPQFIDRKHGRDEISYDHPLLEPILKETYG
ILCFQEQIMRLAQDLAGYSLGQADLLRRAMGKKKAEEMNKQRETFIDGATKNGVQQKIAE
KLFEQMLQFAEYCLSYDTEILTVEYGLIPISKIVEEKIECTVYTVNNQGYVYTQPIAQWH
NRGEQEVFEYYLEDGSVIRATKDHKFMTVEGQMLPIDEIFEKELDLQQINFN
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgtaggtttacatattcatagtgattatagtttactggatggggcatcacaa
ttaccccaattaattgaccgagcattagagttaggaatgtctgcgatcgctatcaccgat
cacggcgttatgtatggggcgattgagttaattaaaacctgccgaaataaaggaataaaa
cccattattggcaatgagatgtatgtaattaatggtgatgttaaagttcaggatgagaag
aataagaaacgaagaaaatatcatcaagtggtcttagctaaaaatagccaaggttataaa
aacttagttaaattaaccactatttcacacctggaagggtttcaaggaaaaggcattttt
gcacgtccctgtattaataaagaactattagaacaatatcacgaagggttaattgttacc
agtgcttgtttagggggagaaattccccaagcaattttacaagggcgttatgatgtcgcg
cgggaagtcgctcaatggtatcaaagggtatttggagaagatttttatttagaaattcaa
gatcatggttctccagaagatcggatggtaaacgttgaaattgttaaaattagtcgagaa
ttaaatattaaaattattgcaacaaatgactcccattttatctcctgcaatgatgtggaa
gcccatgatgccttactttgtattaatactcaaaaattaattagtgaagaaaaaaggatg
cgctatagcggtacagaatatttaaaatctgccgaagaaatggggcaattgtttcaagat
cacctacctaatgatatcattcaagaagcgattaataataccgtagaagttgctaataaa
gttgaaccctataagggcattttgggagaacctcgtatccctgactatccaattccaccc
gatcatacggcggatacttacttagaagaagttacctggaaagggttactacaaagaatg
aatgctaaaaccagaagcgagattaaacctgtttataaagagcgcttagaatatgaacta
aaaatgatgcaacagatggggttttctacttattttttagtggtttgggattatattaaa
tttgccagagataacaatattgccgttgggccaggacgaggttcggctgcgggatcattg
gtcgcttatgctttaaaaatcaccaatattgatccagtttatcatggtttattatttgaa
agatttttaaatcctgaacggaaatctatgcctgatattgatacggatttctgtattgaa
agacgagatgaaatgattaaatatgttactgataaatatggagacgataaggtagcccaa
attattacttttaaccgcatgacttctaaagctgtgttaaaagatgtcgcccgggtatta
ggaatttcctataaaaattcggataaaatggctaaattaattccggtttcacggggaaaa
ccagcccgtttgaaagtgatgatttcagatcaaagtcccgcgccggaattcaaagaagcc
tatgataacgaagatgttgctattcataatgatgccggggatgaagttggaacaattaaa
gttaaacaatggttagatatggcaattcggattgaaggtacgaataaaaccttcggagtt
catgcagcgggtgtggtgatttccaaacagtctttagacgaaattgttcccctacaacgg
aataatgatggggcggtaattactcaatattatatggaggatttagaagccgttgggcta
ttaaaaatggactttttaggcttgaaaaatttaaccatgattcaaaaagccgttgattat
attgaacaaaaacatcactataaaattgatcctgaaaaacttccttctgatattgaaaga
aaagcccaagatgcctataaaacccataaaaagttacctgaagatgtgcagaaaacttat
aaattactggaaaaaggagatttagatggcatctttcagttagaatcttctggaatgatg
gatattgttaaaaaactcaaaccttcctgtttagatgatatttcttctattttagcgctg
tatcgtccggggcccttagatgcgggtttaattccacaatttattgatcgtaaacatgga
cgggatgaaattagctatgatcatccactgttagagccaattttaaaagaaacctatgga
attttatgttttcaagaacaaattatgagattagctcaagatttagcgggctattcttta
ggtcaagccgatttgttaagacgagcgatgggaaagaaaaaagccgaagaaatgaataag
caacgggagacatttattgatggagcaactaaaaatggagttcagcaaaaaatcgccgaa
aaactgtttgaacagatgcttcaattcgcggaatattgtttaagttatgatacagaaatt
ttaaccgttgaatatgggttaatacccattagtaaaattgttgaggaaaaaatagaatgt
acagtttatactgttaataatcagggttatgtctatactcaaccgattgctcaatggcat
aatcgaggagaacaagaagtttttgaatattacctagaagatggttcagttattcgagcg
acaaaagatcataaatttatgactgttgagggtcaaatgttacctattgatgaaattttt
gaaaaagagttagacttacaacagattaattttaattaa
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