Planktothrix agardhii: NIES204_02660
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Entry
NIES204_02660 CDS
T05658
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pagh
Planktothrix agardhii
Pathway
pagh03420
Nucleotide excision repair
pagh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pagh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NIES204_02660 (pcrA)
03430 Mismatch repair
NIES204_02660 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pagh03400
]
NIES204_02660 (pcrA)
Enzymes [BR:
pagh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NIES204_02660 (pcrA)
DNA repair and recombination proteins [BR:
pagh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NIES204_02660 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
NIES204_02660 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
PcrA_UvrD_tudor
AAA_30
AAA_11
DEAD
ResIII
CarD_TRCF_RID
AAA_16
GA
DUF87
Motif
Other DBs
NCBI-ProteinID:
BBD53004
LinkDB
All DBs
Position
complement(325793..328231)
Genome browser
AA seq
812 aa
AA seq
DB search
MCPRPPATDKIEVDSIPVFSVAMTQTIDFLSHLNTCQRQAVEHFCGPMLVVAGAGSGKTR
ALTYRIANLIRSHRVHPENILAVTFTNKAAKEIKERVELIFAQQQAELEFGKPLSALAAD
EQTRLKSKVYRSISKHLWMGTFHSLCARILRYDINKYQDESGRKWDKNFSIFDEDDAQKL
VKHIVLKDMNLDDKKFEPKKIRYSISNAKNLGFSPQQYARENPDYYGRVVSEVYSSYQSQ
LASNNALDFDDLIRVTVDLLSQNEQILAYWHQKFCHILVDEYQDTNRTQYNLIRLLVTNG
ENPRTIKNWQNRSIFVVGDVDQSIYSFRMADYKILLEFQQDFGDRLPDDDTRTMIKLEEN
YRSRENILQVANHLIQQNTERIDKILRPTRGEGLPIYCYRADDEVDEAKFILSQIQGISQ
QNPELDYGAFAILYRTNAQSRALEDVLLRNNILYTVVGGLRFYDRKEIKDSISYLRVIAN
PADSISLLRIINVPRRGIGKTTIDGLLNASKQLGIPLWEVLSDEDSVNTIAGRSAKSVNQ
FAQTIKTWQERLEDHSAMQILEGILQDAGYIQDLKNEGTDEAENRLENIKELTNAVSQFQ
EEYEDNTLGGFLASASLASDLDNLKEGQQAVSLLTLHAAKGLEFPIVFLVGLEQGLFPNY
RSLNDPLSIEEERRLCYVGITRAQEQLFLTHACQRRLWGALESCIPSMFLQELPEGLIHG
YTPPIQPKTTKNKGTKKESKSPTEIKQPAKSDKLESDVKDWKVGDKVFHRTFGIGEVTHV
FSNKDKMSLAIKFSSLSPKILDPKTVPLQRFK
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
gtgtgtccgcgacccccggctacggataaaatagaagttgattcaattcccgtgttttct
gtagccatgactcaaacaattgatttccttagccatctaaatacctgccaacgtcaggcg
gtggaacatttttgtggcccgatgctggtggtggcgggggcaggttcgggtaaaacacgg
gctttaacctatcgcatcgctaatttaattcgcagtcatcgggttcatcctgagaacatt
ttggcggtgacttttactaataaagctgccaaggaaattaaagaacgggttgagttaatt
tttgctcaacaacaggcagaactcgaatttggaaaacccttatcagctttagctgccgat
gaacaaactcgcttgaaatcaaaggtttatcgcagtattagcaaacatctttggatggga
actttccatagtttatgcgctcggattctaagatatgatattaataaatatcaagacgaa
agtggcagaaagtgggataagaatttctccatctttgatgaagatgatgcccaaaagtta
gttaagcatattgttctcaaagatatgaatttagatgataagaaatttgaacctaaaaaa
attagatattctattagtaatgctaaaaacctagggttttcgcctcaacaatatgccagg
gaaaatcctgattattatggtagagtcgtatcggaagtttatagttcctatcaatctcaa
ttagcttcaaataatgccttagattttgatgatttaattagagtcaccgttgatttactc
agtcaaaatgagcaaatattagcctattggcatcaaaaattctgccatattttagtagac
gaatatcaagatactaaccgcactcaatataatttaattcggttattagttaccaatggg
gaaaaccccagaaccattaaaaattggcaaaatcgctctatttttgtggtgggagacgta
gatcaatctatttattcgtttcggatggcagactataaaatattgttagaatttcaacag
gattttggcgatcgcctccccgatgacgatacccgtactatgattaaactggaggaaaat
tatcgctcccgggaaaatattttacaagtagcaaatcatctaattcaacaaaataccgaa
cgcattgacaaaatcctccgtcccacccgaggagaagggctaccaatttattgttatcgg
gcagatgatgaagtagatgaagccaaatttattctatcacaaattcaaggaattagtcaa
caaaatcccgaattagattacggggcgtttgccattttatatcgaaccaacgcccaatct
cgcgccctagaagatgtgttattaagaaataatattctctataccgttgtcgggggatta
aggttctatgaccgcaaagaaatcaaggattccatatcgtatttacgagtaattgctaac
cccgccgatagtattagtttacttagaattattaatgttccccgtcgaggtattggtaaa
accactattgatgggttattaaatgcgtctaaacagttaggaatacccctttgggaagtg
cttagtgatgaagattctgttaataccatagccggacgttcagcaaaatccgtaaatcaa
tttgcccaaactattaaaacttggcaagaacgcctagaagaccattccgccatgcaaatt
ttagaaggaattttacaggatgcaggttatattcaagacttgaaaaatgaaggaacagat
gaagccgaaaaccgcttagaaaatattaaagaattgacgaatgccgtctcccaatttcaa
gaggaatatgaggataataccctgggcggatttttagccagtgcctccttagcttccgat
ttagataacttaaaagaaggacaacaagcggtttccttattaaccctccatgcagcgaaa
ggattagaatttccgattgtatttttagtcggtttagaacagggacttttccccaattat
cgcagtttaaatgaccccttatctattgaagaggaacgacgtttatgttatgttgggatt
actcgcgcccaggaacagttattcttaacccatgcttgtcaacggcggttatggggagct
ttagaatcctgtatcccctcaatgtttttacaagaattacccgaaggattaattcatggt
tatacccctcccattcaacccaaaacaactaaaaataaaggaactaaaaaagagtcaaaa
tcaccgactgagattaaacaaccagccaaaagtgacaaattagaatcggatgttaaggat
tggaaagtaggggataaagtttttcatcgtacctttggaattggagaagtcacccacgtt
ttctcaaataaagataaaatgtctttagcgattaaatttagcagtctcagtcctaaaatt
ctcgatccgaaaactgttcccttgcaacgtttcaaataa
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